Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT2A6NDA9 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT2A6NDA9 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.03□□□□□ -0.16
LRIT2A6NDA9 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT2A6NDA9 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
LRIT2A6NDA9 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LRIT2A6NDA9 FAM21FP-201ENST00000426241 1131 ntBASIC14.03□□□□□ -0.16
LRIT2A6NDA9 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT2A6NDA9 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.03□□□□□ -0.16
LRIT2A6NDA9 RNA5SP412-201ENST00000516234 123 ntBASIC14.03□□□□□ -0.16
LRIT2A6NDA9 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.03□□□□□ -0.16
LRIT2A6NDA9 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.03□□□□□ -0.16
LRIT2A6NDA9 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
LRIT2A6NDA9 MIR4741-201ENST00000579822 90 ntBASIC14.03□□□□□ -0.16
LRIT2A6NDA9 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT2A6NDA9 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.03□□□□□ -0.16
LRIT2A6NDA9 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.03□□□□□ -0.16
LRIT2A6NDA9 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.03□□□□□ -0.16
LRIT2A6NDA9 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.03□□□□□ -0.16
LRIT2A6NDA9 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT2A6NDA9 KRT8P28-201ENST00000433288 1390 ntBASIC14.03□□□□□ -0.16
LRIT2A6NDA9 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LRIT2A6NDA9 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT2A6NDA9 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.03□□□□□ -0.16
LRIT2A6NDA9 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT2A6NDA9 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.03□□□□□ -0.16
LRIT2A6NDA9 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.03□□□□□ -0.16
LRIT2A6NDA9 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT2A6NDA9 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.03□□□□□ -0.16
LRIT2A6NDA9 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT2A6NDA9 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.03□□□□□ -0.16
LRIT2A6NDA9 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LRIT2A6NDA9 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
LRIT2A6NDA9 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT2A6NDA9 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.03□□□□□ -0.16
LRIT2A6NDA9 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.02□□□□□ -0.16
LRIT2A6NDA9 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRIT2A6NDA9 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRIT2A6NDA9 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRIT2A6NDA9 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.02□□□□□ -0.16
LRIT2A6NDA9 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
LRIT2A6NDA9 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LRIT2A6NDA9 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRIT2A6NDA9 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.02□□□□□ -0.16
LRIT2A6NDA9 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRIT2A6NDA9 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRIT2A6NDA9 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRIT2A6NDA9 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRIT2A6NDA9 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRIT2A6NDA9 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRIT2A6NDA9 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LRIT2A6NDA9 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LRIT2A6NDA9 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRIT2A6NDA9 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.02□□□□□ -0.16
LRIT2A6NDA9 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.02□□□□□ -0.16
LRIT2A6NDA9 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRIT2A6NDA9 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRIT2A6NDA9 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LRIT2A6NDA9 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
LRIT2A6NDA9 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRIT2A6NDA9 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
LRIT2A6NDA9 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRIT2A6NDA9 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRIT2A6NDA9 MIR326-201ENST00000362220 95 ntBASIC14.02□□□□□ -0.17
LRIT2A6NDA9 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.02□□□□□ -0.17
LRIT2A6NDA9 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.02□□□□□ -0.17
LRIT2A6NDA9 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.02□□□□□ -0.17
LRIT2A6NDA9 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.02□□□□□ -0.17
LRIT2A6NDA9 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LRIT2A6NDA9 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.02□□□□□ -0.17
LRIT2A6NDA9 AC079178.1-201ENST00000420915 656 ntBASIC14.02□□□□□ -0.17
LRIT2A6NDA9 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRIT2A6NDA9 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.02□□□□□ -0.17
LRIT2A6NDA9 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.02□□□□□ -0.17
LRIT2A6NDA9 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.02□□□□□ -0.17
LRIT2A6NDA9 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.02□□□□□ -0.17
LRIT2A6NDA9 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.02□□□□□ -0.17
LRIT2A6NDA9 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRIT2A6NDA9 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.02□□□□□ -0.17
LRIT2A6NDA9 DUX4L46-201ENST00000566845 751 ntBASIC14.02□□□□□ -0.17
LRIT2A6NDA9 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.02□□□□□ -0.17
LRIT2A6NDA9 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
LRIT2A6NDA9 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.02□□□□□ -0.17
LRIT2A6NDA9 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.02□□□□□ -0.17
LRIT2A6NDA9 AC244157.2-201ENST00000616239 1006 ntBASIC14.02□□□□□ -0.17
LRIT2A6NDA9 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRIT2A6NDA9 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRIT2A6NDA9 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRIT2A6NDA9 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRIT2A6NDA9 OR2I1P-210ENST00000642037 4691 ntBASIC14.02□□□□□ -0.17
LRIT2A6NDA9 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRIT2A6NDA9 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRIT2A6NDA9 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRIT2A6NDA9 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRIT2A6NDA9 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRIT2A6NDA9 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
LRIT2A6NDA9 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LRIT2A6NDA9 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms