Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 HLA-K-203ENST00000430151 1046 ntBASIC14.03□□□□□ -0.16
AP4S1Q9Y587 FAM58CP-201ENST00000435741 640 ntBASIC14.03□□□□□ -0.16
AP4S1Q9Y587 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 AC025048.3-201ENST00000590609 569 ntBASIC14.03□□□□□ -0.16
AP4S1Q9Y587 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 AC005702.4-201ENST00000618393 416 ntBASIC14.03□□□□□ -0.16
AP4S1Q9Y587 LINC00628-201ENST00000628516 1289 ntBASIC14.03□□□□□ -0.16
AP4S1Q9Y587 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 AC011498.7-201ENST00000624986 2027 ntBASIC14.03□□□□□ -0.16
AP4S1Q9Y587 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 PCDHA5-203ENST00000614258 4248 ntBASIC14.02□□□□□ -0.16
AP4S1Q9Y587 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP4S1Q9Y587 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP4S1Q9Y587 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP4S1Q9Y587 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP4S1Q9Y587 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP4S1Q9Y587 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP4S1Q9Y587 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.02□□□□□ -0.16
AP4S1Q9Y587 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP4S1Q9Y587 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP4S1Q9Y587 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.02□□□□□ -0.16
AP4S1Q9Y587 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP4S1Q9Y587 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP4S1Q9Y587 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
AP4S1Q9Y587 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP4S1Q9Y587 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP4S1Q9Y587 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP4S1Q9Y587 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP4S1Q9Y587 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP4S1Q9Y587 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP4S1Q9Y587 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP4S1Q9Y587 AL592309.1-201ENST00000443127 649 ntBASIC14.02□□□□□ -0.17
AP4S1Q9Y587 TIMM8BP1-201ENST00000452384 211 ntBASIC14.02□□□□□ -0.17
AP4S1Q9Y587 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.02□□□□□ -0.17
AP4S1Q9Y587 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.02□□□□□ -0.17
AP4S1Q9Y587 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.02□□□□□ -0.17
AP4S1Q9Y587 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.02□□□□□ -0.17
AP4S1Q9Y587 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
AP4S1Q9Y587 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
AP4S1Q9Y587 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.02□□□□□ -0.17
AP4S1Q9Y587 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP4S1Q9Y587 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP4S1Q9Y587 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP4S1Q9Y587 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP4S1Q9Y587 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP4S1Q9Y587 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
AP4S1Q9Y587 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP4S1Q9Y587 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP4S1Q9Y587 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP4S1Q9Y587 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC14.02□□□□□ -0.17
AP4S1Q9Y587 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC14.02□□□□□ -0.17
AP4S1Q9Y587 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP4S1Q9Y587 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
AP4S1Q9Y587 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
AP4S1Q9Y587 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC14.01□□□□□ -0.17
AP4S1Q9Y587 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.01□□□□□ -0.17
AP4S1Q9Y587 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.01□□□□□ -0.17
AP4S1Q9Y587 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AP4S1Q9Y587 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.01□□□□□ -0.17
AP4S1Q9Y587 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.01□□□□□ -0.17
AP4S1Q9Y587 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC14.01□□□□□ -0.17
AP4S1Q9Y587 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP4S1Q9Y587 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
AP4S1Q9Y587 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP4S1Q9Y587 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.01□□□□□ -0.17
AP4S1Q9Y587 KRT8P35-201ENST00000483942 1338 ntBASIC14.01□□□□□ -0.17
AP4S1Q9Y587 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.01□□□□□ -0.17
AP4S1Q9Y587 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AP4S1Q9Y587 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.01□□□□□ -0.17
AP4S1Q9Y587 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.01□□□□□ -0.17
AP4S1Q9Y587 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.01□□□□□ -0.17
AP4S1Q9Y587 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.01□□□□□ -0.17
AP4S1Q9Y587 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.01□□□□□ -0.17
AP4S1Q9Y587 ALG1L8P-201ENST00000533887 760 ntBASIC14.01□□□□□ -0.17
AP4S1Q9Y587 AC026150.2-201ENST00000564693 1156 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms