Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 NPTN-IT1-201ENST00000628401 2283 ntBASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 AL513480.1-201ENST00000451731 511 ntBASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 AC024267.1-201ENST00000582320 895 ntBASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 AL136982.4-201ENST00000437689 1740 ntBASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC14.12□□□□□ -0.15
LRCH1Q9Y2L9 MEX3B-202ENST00000558133 4333 ntBASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 AC125807.2-201ENST00000513358 3514 ntBASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 PRYP6-201ENST00000514804 343 ntBASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 AL513190.1-201ENST00000621254 727 ntBASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 C20orf181-201ENST00000623918 480 ntBASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 AL645728.2-202ENST00000641679 227 ntBASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 AC079781.4-201ENST00000641908 219 ntBASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 AC092865.6-201ENST00000642101 219 ntBASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 CLK3P2-201ENST00000427566 1453 ntBASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 MIR193BHG-211ENST00000641433 5365 ntBASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 AC134407.3-201ENST00000624035 2139 ntBASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
LRCH1Q9Y2L9 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms