Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
FOXA2Q9Y261 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12□□□□□ -0.49
FOXA2Q9Y261 TDH-203ENST00000531764 1110 ntBASIC12□□□□□ -0.49
FOXA2Q9Y261 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
FOXA2Q9Y261 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC12□□□□□ -0.49
FOXA2Q9Y261 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
FOXA2Q9Y261 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC12□□□□□ -0.49
FOXA2Q9Y261 AC015936.2-201ENST00000593177 259 ntBASIC12□□□□□ -0.49
FOXA2Q9Y261 AC010319.3-201ENST00000597028 470 ntBASIC12□□□□□ -0.49
FOXA2Q9Y261 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12□□□□□ -0.49
FOXA2Q9Y261 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC12□□□□□ -0.49
FOXA2Q9Y261 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
FOXA2Q9Y261 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12□□□□□ -0.49
FOXA2Q9Y261 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
FOXA2Q9Y261 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12□□□□□ -0.49
FOXA2Q9Y261 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
FOXA2Q9Y261 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12□□□□□ -0.49
FOXA2Q9Y261 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12□□□□□ -0.49
FOXA2Q9Y261 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12□□□□□ -0.49
FOXA2Q9Y261 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12□□□□□ -0.49
FOXA2Q9Y261 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
FOXA2Q9Y261 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12□□□□□ -0.49
FOXA2Q9Y261 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
FOXA2Q9Y261 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
FOXA2Q9Y261 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
FOXA2Q9Y261 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12□□□□□ -0.49
FOXA2Q9Y261 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12□□□□□ -0.49
FOXA2Q9Y261 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12□□□□□ -0.49
FOXA2Q9Y261 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12□□□□□ -0.49
FOXA2Q9Y261 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
FOXA2Q9Y261 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
FOXA2Q9Y261 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12□□□□□ -0.49
FOXA2Q9Y261 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12□□□□□ -0.49
FOXA2Q9Y261 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
FOXA2Q9Y261 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
FOXA2Q9Y261 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
FOXA2Q9Y261 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 COX5BP8-201ENST00000416911 349 ntBASIC11.99□□□□□ -0.49
FOXA2Q9Y261 NME2P1-201ENST00000426182 414 ntBASIC11.99□□□□□ -0.49
FOXA2Q9Y261 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 ACTG1P3-201ENST00000431775 1114 ntBASIC11.99□□□□□ -0.49
FOXA2Q9Y261 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 AC026434.2-201ENST00000506094 1078 ntBASIC11.99□□□□□ -0.49
FOXA2Q9Y261 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 CR383656.12-201ENST00000549567 513 ntBASIC11.99□□□□□ -0.49
FOXA2Q9Y261 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 CLUHP6-201ENST00000580789 941 ntBASIC11.99□□□□□ -0.49
FOXA2Q9Y261 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 SRP9-204ENST00000619790 377 ntTSL 2 BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 CNTNAP3P2-201ENST00000617175 3861 ntBASIC11.99□□□□□ -0.49
FOXA2Q9Y261 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 SALL4P5-201ENST00000419001 1760 ntBASIC11.99□□□□□ -0.49
FOXA2Q9Y261 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
FOXA2Q9Y261 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms