Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 PTGER4P2-201ENST00000328411 252 ntBASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 RGS5-216ENST00000449680 788 ntTSL 3 BASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 PTGER4P3-201ENST00000458150 252 ntBASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 OR2A1-AS1-210ENST00000496968 531 ntBASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 ELP5-212ENST00000574255 671 ntTSL 2 BASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 MBP-238ENST00000580402 915 ntTSL 5 BASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 LINC00244-201ENST00000625073 613 ntBASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 AC233280.19-201ENST00000633223 136 ntBASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 SALL4P5-201ENST00000419001 1760 ntBASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 PYY2-201ENST00000315776 282 ntBASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 BPIFB5P-201ENST00000457066 1099 ntBASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 AC008026.2-201ENST00000495438 348 ntBASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 APOC1-209ENST00000592885 562 ntTSL 3 BASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZC3H4Q9UPT8 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 AL596087.1-201ENST00000400979 1969 ntBASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 AL929302.1-201ENST00000426556 871 ntBASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 HNRNPA1P42-201ENST00000458678 957 ntBASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 ALG1L3P-201ENST00000503331 765 ntBASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 RNA5SP406-201ENST00000516106 112 ntBASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 GOLGA2P7-209ENST00000560408 745 ntBASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms