Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP4E1Q9UPM8 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.35■□□□□ 0.05
AP4E1Q9UPM8 AL136309.1-201ENST00000403917 691 ntBASIC15.35■□□□□ 0.05
AP4E1Q9UPM8 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.35■□□□□ 0.05
AP4E1Q9UPM8 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.35■□□□□ 0.05
AP4E1Q9UPM8 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
AP4E1Q9UPM8 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
AP4E1Q9UPM8 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.35■□□□□ 0.05
AP4E1Q9UPM8 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.35■□□□□ 0.05
AP4E1Q9UPM8 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.35■□□□□ 0.05
AP4E1Q9UPM8 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.35■□□□□ 0.05
AP4E1Q9UPM8 AC103988.2-201ENST00000561804 725 ntBASIC15.35■□□□□ 0.05
AP4E1Q9UPM8 C2orf69P2-201ENST00000562032 1123 ntBASIC15.35■□□□□ 0.05
AP4E1Q9UPM8 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.35■□□□□ 0.05
AP4E1Q9UPM8 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
AP4E1Q9UPM8 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP4E1Q9UPM8 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
AP4E1Q9UPM8 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP4E1Q9UPM8 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.35■□□□□ 0.05
AP4E1Q9UPM8 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.35■□□□□ 0.05
AP4E1Q9UPM8 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.35■□□□□ 0.05
AP4E1Q9UPM8 AL590440.2-201ENST00000641973 1595 ntBASIC15.35■□□□□ 0.05
AP4E1Q9UPM8 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP4E1Q9UPM8 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP4E1Q9UPM8 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.35■□□□□ 0.05
AP4E1Q9UPM8 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
AP4E1Q9UPM8 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
AP4E1Q9UPM8 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
AP4E1Q9UPM8 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
AP4E1Q9UPM8 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.35■□□□□ 0.05
AP4E1Q9UPM8 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
AP4E1Q9UPM8 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 ANKRD19P-201ENST00000338192 862 ntBASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 SNX29P1-201ENST00000548357 1007 ntBASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 ZACNP1-201ENST00000612259 710 ntBASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 AL365209.1-201ENST00000624418 6473 ntBASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 AC117489.1-201ENST00000625169 3217 ntBASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP4E1Q9UPM8 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
AP4E1Q9UPM8 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
AP4E1Q9UPM8 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
AP4E1Q9UPM8 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
AP4E1Q9UPM8 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
AP4E1Q9UPM8 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
AP4E1Q9UPM8 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP4E1Q9UPM8 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP4E1Q9UPM8 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP4E1Q9UPM8 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP4E1Q9UPM8 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
AP4E1Q9UPM8 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP4E1Q9UPM8 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
AP4E1Q9UPM8 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP4E1Q9UPM8 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.33■□□□□ 0.04
AP4E1Q9UPM8 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms