Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 AC112492.5-201ENST00000421897 457 ntBASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 MTND6P24-201ENST00000440466 518 ntBASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 GNAQP1-201ENST00000444815 1067 ntBASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 KRT18P43-201ENST00000469825 1281 ntBASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 KRT17P8-201ENST00000540749 863 ntBASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 RAB43P1-201ENST00000561790 589 ntBASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 AC104794.3-201ENST00000566840 1248 ntBASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 AC084346.2-201ENST00000607097 949 ntBASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.15□□□□□ -0.14
CCM2LQ9NUG4 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.15□□□□□ -0.15
CCM2LQ9NUG4 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
CCM2LQ9NUG4 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 AC020658.7-201ENST00000624274 2442 ntBASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 AL035456.1-201ENST00000456064 1369 ntBASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 AC079776.1-201ENST00000401540 1152 ntBASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 TEX28P1-201ENST00000613479 1221 ntBASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 TEX28P2-201ENST00000617764 1221 ntBASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 AC004840.1-201ENST00000636359 365 ntBASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 FAM90A12P-201ENST00000519497 2375 ntBASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 FAM90A24P-201ENST00000520792 2369 ntBASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CCM2LQ9NUG4 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms