Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CDH20Q9HBT6 MIR1202-201ENST00000408529 83 ntBASIC13□□□□□ -0.33
CDH20Q9HBT6 CD8B2-202ENST00000417670 633 ntBASIC13□□□□□ -0.33
CDH20Q9HBT6 ATP5G2P4-201ENST00000442175 420 ntBASIC13□□□□□ -0.33
CDH20Q9HBT6 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13□□□□□ -0.33
CDH20Q9HBT6 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13□□□□□ -0.33
CDH20Q9HBT6 AP000812.2-201ENST00000538934 718 ntBASIC13□□□□□ -0.33
CDH20Q9HBT6 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13□□□□□ -0.33
CDH20Q9HBT6 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13□□□□□ -0.33
CDH20Q9HBT6 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13□□□□□ -0.33
CDH20Q9HBT6 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13□□□□□ -0.33
CDH20Q9HBT6 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13□□□□□ -0.33
CDH20Q9HBT6 OR10B1P-201ENST00000601666 907 ntBASIC13□□□□□ -0.33
CDH20Q9HBT6 MIR6805-201ENST00000615055 62 ntBASIC13□□□□□ -0.33
CDH20Q9HBT6 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDH20Q9HBT6 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13□□□□□ -0.33
CDH20Q9HBT6 AC006453.4-201ENST00000636949 1252 ntBASIC13□□□□□ -0.33
CDH20Q9HBT6 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDH20Q9HBT6 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13□□□□□ -0.33
CDH20Q9HBT6 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CDH20Q9HBT6 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDH20Q9HBT6 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDH20Q9HBT6 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13□□□□□ -0.33
CDH20Q9HBT6 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CDH20Q9HBT6 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC13□□□□□ -0.33
CDH20Q9HBT6 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CDH20Q9HBT6 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDH20Q9HBT6 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13□□□□□ -0.33
CDH20Q9HBT6 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CDH20Q9HBT6 FGD5P1-202ENST00000614866 2498 ntBASIC13□□□□□ -0.33
CDH20Q9HBT6 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CDH20Q9HBT6 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13□□□□□ -0.33
CDH20Q9HBT6 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
CDH20Q9HBT6 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13□□□□□ -0.33
CDH20Q9HBT6 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDH20Q9HBT6 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDH20Q9HBT6 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CDH20Q9HBT6 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
CDH20Q9HBT6 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDH20Q9HBT6 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CDH20Q9HBT6 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13□□□□□ -0.33
CDH20Q9HBT6 LINC01101-201ENST00000622953 1884 ntBASIC12.99□□□□□ -0.33
CDH20Q9HBT6 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 AHCYP2-201ENST00000430630 1300 ntBASIC12.99□□□□□ -0.33
CDH20Q9HBT6 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 AC023310.1-201ENST00000554836 735 ntBASIC12.99□□□□□ -0.33
CDH20Q9HBT6 AP005482.1-201ENST00000563722 1273 ntBASIC12.99□□□□□ -0.33
CDH20Q9HBT6 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CDH20Q9HBT6 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms