Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.67□□□□□ -0.22
TRIM2Q9C040 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.67□□□□□ -0.22
TRIM2Q9C040 AL359881.2-201ENST00000602973 570 ntBASIC13.67□□□□□ -0.22
TRIM2Q9C040 AL008721.1-201ENST00000609964 604 ntBASIC13.67□□□□□ -0.22
TRIM2Q9C040 AL033527.5-201ENST00000641382 801 ntBASIC13.67□□□□□ -0.22
TRIM2Q9C040 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.67□□□□□ -0.22
TRIM2Q9C040 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.67□□□□□ -0.22
TRIM2Q9C040 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM2Q9C040 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM2Q9C040 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
TRIM2Q9C040 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM2Q9C040 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TRIM2Q9C040 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM2Q9C040 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TRIM2Q9C040 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM2Q9C040 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM2Q9C040 AC092135.3-201ENST00000624151 1846 ntBASIC13.67□□□□□ -0.22
TRIM2Q9C040 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TRIM2Q9C040 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRIM2Q9C040 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
TRIM2Q9C040 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM2Q9C040 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.66□□□□□ -0.22
TRIM2Q9C040 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM2Q9C040 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM2Q9C040 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM2Q9C040 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM2Q9C040 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM2Q9C040 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM2Q9C040 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM2Q9C040 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM2Q9C040 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TRIM2Q9C040 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.66□□□□□ -0.22
TRIM2Q9C040 AL031595.1-201ENST00000623969 4709 ntBASIC13.66□□□□□ -0.22
TRIM2Q9C040 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM2Q9C040 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM2Q9C040 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM2Q9C040 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM2Q9C040 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM2Q9C040 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.66□□□□□ -0.22
TRIM2Q9C040 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM2Q9C040 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM2Q9C040 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM2Q9C040 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
TRIM2Q9C040 ARSEP1-201ENST00000420443 635 ntBASIC13.66□□□□□ -0.22
TRIM2Q9C040 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRIM2Q9C040 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.66□□□□□ -0.22
TRIM2Q9C040 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.66□□□□□ -0.22
TRIM2Q9C040 FO681548.1-201ENST00000455617 1132 ntBASIC13.66□□□□□ -0.22
TRIM2Q9C040 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.66□□□□□ -0.22
TRIM2Q9C040 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.66□□□□□ -0.22
TRIM2Q9C040 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.66□□□□□ -0.22
TRIM2Q9C040 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.66□□□□□ -0.22
TRIM2Q9C040 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM2Q9C040 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.66□□□□□ -0.22
TRIM2Q9C040 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.66□□□□□ -0.22
TRIM2Q9C040 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.66□□□□□ -0.22
TRIM2Q9C040 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.66□□□□□ -0.22
TRIM2Q9C040 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM2Q9C040 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM2Q9C040 AL136172.1-201ENST00000598590 1394 ntBASIC13.66□□□□□ -0.22
TRIM2Q9C040 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.66□□□□□ -0.22
TRIM2Q9C040 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM2Q9C040 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM2Q9C040 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.66□□□□□ -0.22
TRIM2Q9C040 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
TRIM2Q9C040 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.66□□□□□ -0.22
TRIM2Q9C040 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM2Q9C040 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
TRIM2Q9C040 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.66□□□□□ -0.22
TRIM2Q9C040 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM2Q9C040 AL138725.1-201ENST00000407347 1314 ntBASIC13.65□□□□□ -0.22
TRIM2Q9C040 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.65□□□□□ -0.22
TRIM2Q9C040 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.65□□□□□ -0.22
TRIM2Q9C040 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM2Q9C040 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
TRIM2Q9C040 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TRIM2Q9C040 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM2Q9C040 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.65□□□□□ -0.22
TRIM2Q9C040 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.65□□□□□ -0.22
TRIM2Q9C040 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.65□□□□□ -0.22
TRIM2Q9C040 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.65□□□□□ -0.22
TRIM2Q9C040 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.65□□□□□ -0.22
TRIM2Q9C040 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
TRIM2Q9C040 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.65□□□□□ -0.22
TRIM2Q9C040 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM2Q9C040 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM2Q9C040 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM2Q9C040 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.65□□□□□ -0.22
TRIM2Q9C040 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.65□□□□□ -0.22
TRIM2Q9C040 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM2Q9C040 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.65□□□□□ -0.22
TRIM2Q9C040 ATP5G2P4-201ENST00000442175 420 ntBASIC13.65□□□□□ -0.22
TRIM2Q9C040 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
TRIM2Q9C040 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM2Q9C040 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.65□□□□□ -0.22
TRIM2Q9C040 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM2Q9C040 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.65□□□□□ -0.22
TRIM2Q9C040 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.65□□□□□ -0.22
TRIM2Q9C040 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.65□□□□□ -0.22
TRIM2Q9C040 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms