Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
YME1L1Q96TA2 KRT8P31-201ENST00000504812 1408 ntBASIC15.78■□□□□ 0.12
YME1L1Q96TA2 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
YME1L1Q96TA2 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
YME1L1Q96TA2 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
YME1L1Q96TA2 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
YME1L1Q96TA2 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
YME1L1Q96TA2 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
YME1L1Q96TA2 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.78■□□□□ 0.12
YME1L1Q96TA2 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
YME1L1Q96TA2 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
YME1L1Q96TA2 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
YME1L1Q96TA2 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.78■□□□□ 0.12
YME1L1Q96TA2 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
YME1L1Q96TA2 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
YME1L1Q96TA2 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
YME1L1Q96TA2 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
YME1L1Q96TA2 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
YME1L1Q96TA2 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
YME1L1Q96TA2 FTH1P22-201ENST00000456305 520 ntBASIC15.78■□□□□ 0.12
YME1L1Q96TA2 AC114947.1-202ENST00000514136 344 ntBASIC15.78■□□□□ 0.12
YME1L1Q96TA2 PTK2-225ENST00000520892 571 ntTSL 4 BASIC15.78■□□□□ 0.12
YME1L1Q96TA2 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
YME1L1Q96TA2 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
YME1L1Q96TA2 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
YME1L1Q96TA2 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
YME1L1Q96TA2 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
YME1L1Q96TA2 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
YME1L1Q96TA2 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.78■□□□□ 0.12
YME1L1Q96TA2 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
YME1L1Q96TA2 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
YME1L1Q96TA2 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.78■□□□□ 0.12
YME1L1Q96TA2 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
YME1L1Q96TA2 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.77■□□□□ 0.12
YME1L1Q96TA2 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
YME1L1Q96TA2 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
YME1L1Q96TA2 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.77■□□□□ 0.12
YME1L1Q96TA2 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
YME1L1Q96TA2 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
YME1L1Q96TA2 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
YME1L1Q96TA2 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
YME1L1Q96TA2 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
YME1L1Q96TA2 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
YME1L1Q96TA2 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
YME1L1Q96TA2 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.77■□□□□ 0.12
YME1L1Q96TA2 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.77■□□□□ 0.12
YME1L1Q96TA2 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
YME1L1Q96TA2 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
YME1L1Q96TA2 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
YME1L1Q96TA2 DUX4L50-201ENST00000455245 715 ntBASIC15.77■□□□□ 0.12
YME1L1Q96TA2 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC15.77■□□□□ 0.12
YME1L1Q96TA2 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
YME1L1Q96TA2 POLD4-208ENST00000532830 904 ntTSL 3 BASIC15.77■□□□□ 0.12
YME1L1Q96TA2 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC15.77■□□□□ 0.12
YME1L1Q96TA2 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC15.77■□□□□ 0.12
YME1L1Q96TA2 MIR3180-2-201ENST00000581748 88 ntBASIC15.77■□□□□ 0.12
YME1L1Q96TA2 AC005618.3-201ENST00000624928 458 ntBASIC15.77■□□□□ 0.12
YME1L1Q96TA2 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC15.77■□□□□ 0.12
YME1L1Q96TA2 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
YME1L1Q96TA2 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
YME1L1Q96TA2 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
YME1L1Q96TA2 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
YME1L1Q96TA2 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
YME1L1Q96TA2 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
YME1L1Q96TA2 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.77■□□□□ 0.11
YME1L1Q96TA2 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
YME1L1Q96TA2 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.77■□□□□ 0.11
YME1L1Q96TA2 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
YME1L1Q96TA2 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
YME1L1Q96TA2 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
YME1L1Q96TA2 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
YME1L1Q96TA2 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.77■□□□□ 0.11
YME1L1Q96TA2 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
YME1L1Q96TA2 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC15.76■□□□□ 0.11
YME1L1Q96TA2 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
YME1L1Q96TA2 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
YME1L1Q96TA2 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
YME1L1Q96TA2 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
YME1L1Q96TA2 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.76■□□□□ 0.11
YME1L1Q96TA2 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
YME1L1Q96TA2 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
YME1L1Q96TA2 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
YME1L1Q96TA2 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
YME1L1Q96TA2 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
YME1L1Q96TA2 HIST2H2BA-201ENST00000412169 381 ntBASIC15.76■□□□□ 0.11
YME1L1Q96TA2 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC15.76■□□□□ 0.11
YME1L1Q96TA2 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC15.76■□□□□ 0.11
YME1L1Q96TA2 RN7SL530P-201ENST00000485097 298 ntBASIC15.76■□□□□ 0.11
YME1L1Q96TA2 RHEB-207ENST00000496004 744 ntTSL 2 BASIC15.76■□□□□ 0.11
YME1L1Q96TA2 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.76■□□□□ 0.11
YME1L1Q96TA2 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC15.76■□□□□ 0.11
YME1L1Q96TA2 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC15.76■□□□□ 0.11
YME1L1Q96TA2 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.76■□□□□ 0.11
YME1L1Q96TA2 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.76■□□□□ 0.11
YME1L1Q96TA2 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
YME1L1Q96TA2 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC15.76■□□□□ 0.11
YME1L1Q96TA2 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC15.76■□□□□ 0.11
YME1L1Q96TA2 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
YME1L1Q96TA2 AC127024.7-201ENST00000625101 200 ntBASIC15.76■□□□□ 0.11
YME1L1Q96TA2 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms