Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2E2Q96LR5 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC11.46□□□□□ -0.57
UBE2E2Q96LR5 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2E2Q96LR5 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
UBE2E2Q96LR5 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2E2Q96LR5 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
UBE2E2Q96LR5 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC11.46□□□□□ -0.57
UBE2E2Q96LR5 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2E2Q96LR5 PTPA-215ENST00000432124 567 ntTSL 4 BASIC11.46□□□□□ -0.57
UBE2E2Q96LR5 AC012441.2-201ENST00000444843 739 ntBASIC11.46□□□□□ -0.57
UBE2E2Q96LR5 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC11.46□□□□□ -0.57
UBE2E2Q96LR5 OARD1-212ENST00000482515 832 ntTSL 2 BASIC11.46□□□□□ -0.57
UBE2E2Q96LR5 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC11.46□□□□□ -0.57
UBE2E2Q96LR5 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC11.46□□□□□ -0.57
UBE2E2Q96LR5 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC11.46□□□□□ -0.57
UBE2E2Q96LR5 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2E2Q96LR5 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC11.46□□□□□ -0.57
UBE2E2Q96LR5 AC009884.2-201ENST00000603110 324 ntBASIC11.46□□□□□ -0.57
UBE2E2Q96LR5 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC11.46□□□□□ -0.57
UBE2E2Q96LR5 AL162426.1-201ENST00000624141 743 ntBASIC11.46□□□□□ -0.57
UBE2E2Q96LR5 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC11.46□□□□□ -0.57
UBE2E2Q96LR5 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2E2Q96LR5 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2E2Q96LR5 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
UBE2E2Q96LR5 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
UBE2E2Q96LR5 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
UBE2E2Q96LR5 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
UBE2E2Q96LR5 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
UBE2E2Q96LR5 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
UBE2E2Q96LR5 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
UBE2E2Q96LR5 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
UBE2E2Q96LR5 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
UBE2E2Q96LR5 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
UBE2E2Q96LR5 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
UBE2E2Q96LR5 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC11.46□□□□□ -0.58
UBE2E2Q96LR5 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
UBE2E2Q96LR5 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
UBE2E2Q96LR5 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
UBE2E2Q96LR5 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
UBE2E2Q96LR5 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
UBE2E2Q96LR5 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
UBE2E2Q96LR5 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC11.46□□□□□ -0.58
UBE2E2Q96LR5 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
UBE2E2Q96LR5 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 F10-203ENST00000409306 1450 ntTSL 3 BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 CSH2-202ENST00000345366 598 ntTSL 5 BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 SMS-201ENST00000379404 1174 ntTSL 3 BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 ARTN-209ENST00000479128 471 ntTSL 3 BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 AC244452.3-201ENST00000636814 210 ntBASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC11.45□□□□□ -0.58
UBE2E2Q96LR5 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms