Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
USP9XQ93008 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
USP9XQ93008 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
USP9XQ93008 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.61□□□□□ -0.39
USP9XQ93008 TEKT4P2-202ENST00000559466 1312 ntBASIC12.61□□□□□ -0.39
USP9XQ93008 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
USP9XQ93008 HLA-DMA-202ENST00000395303 1007 ntBASIC12.61□□□□□ -0.39
USP9XQ93008 AL121949.3-201ENST00000406684 385 ntBASIC12.61□□□□□ -0.39
USP9XQ93008 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.61□□□□□ -0.39
USP9XQ93008 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
USP9XQ93008 ALG1L7P-201ENST00000502317 768 ntBASIC12.61□□□□□ -0.39
USP9XQ93008 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC12.61□□□□□ -0.39
USP9XQ93008 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC12.61□□□□□ -0.39
USP9XQ93008 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC12.61□□□□□ -0.39
USP9XQ93008 SRP14-208ENST00000560773 468 ntTSL 3 BASIC12.61□□□□□ -0.39
USP9XQ93008 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
USP9XQ93008 ARL17B-207ENST00000575960 731 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
USP9XQ93008 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC12.61□□□□□ -0.39
USP9XQ93008 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC12.61□□□□□ -0.39
USP9XQ93008 NEK4P3-201ENST00000604859 544 ntBASIC12.61□□□□□ -0.39
USP9XQ93008 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC12.61□□□□□ -0.39
USP9XQ93008 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
USP9XQ93008 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
USP9XQ93008 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.61□□□□□ -0.39
USP9XQ93008 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
USP9XQ93008 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
USP9XQ93008 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
USP9XQ93008 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
USP9XQ93008 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
USP9XQ93008 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
USP9XQ93008 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
USP9XQ93008 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
USP9XQ93008 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC12.6□□□□□ -0.39
USP9XQ93008 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
USP9XQ93008 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC12.6□□□□□ -0.39
USP9XQ93008 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
USP9XQ93008 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
USP9XQ93008 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
USP9XQ93008 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
USP9XQ93008 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
USP9XQ93008 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC12.6□□□□□ -0.39
USP9XQ93008 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
USP9XQ93008 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC12.6□□□□□ -0.39
USP9XQ93008 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
USP9XQ93008 AC019109.1-201ENST00000401725 1874 ntBASIC12.6□□□□□ -0.39
USP9XQ93008 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
USP9XQ93008 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC12.6□□□□□ -0.39
USP9XQ93008 AL590440.2-201ENST00000641973 1595 ntBASIC12.6□□□□□ -0.39
USP9XQ93008 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.6□□□□□ -0.39
USP9XQ93008 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
USP9XQ93008 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC12.6□□□□□ -0.39
USP9XQ93008 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC12.6□□□□□ -0.39
USP9XQ93008 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
USP9XQ93008 AC008026.2-201ENST00000495438 348 ntBASIC12.6□□□□□ -0.39
USP9XQ93008 RN7SL564P-201ENST00000496309 250 ntBASIC12.6□□□□□ -0.39
USP9XQ93008 HINT1-205ENST00000508488 703 ntTSL 2 BASIC12.6□□□□□ -0.39
USP9XQ93008 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC12.6□□□□□ -0.39
USP9XQ93008 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC12.6□□□□□ -0.39
USP9XQ93008 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.6□□□□□ -0.39
USP9XQ93008 CES1P2-201ENST00000566467 1242 ntBASIC12.6□□□□□ -0.39
USP9XQ93008 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC12.6□□□□□ -0.39
USP9XQ93008 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC12.6□□□□□ -0.39
USP9XQ93008 AC010531.8-201ENST00000623341 685 ntBASIC12.6□□□□□ -0.39
USP9XQ93008 AC002511.3-201ENST00000638098 420 ntBASIC12.6□□□□□ -0.39
USP9XQ93008 LINC00554-201ENST00000564841 3011 ntBASIC12.6□□□□□ -0.39
USP9XQ93008 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
USP9XQ93008 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
USP9XQ93008 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC12.6□□□□□ -0.39
USP9XQ93008 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
USP9XQ93008 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
USP9XQ93008 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.6□□□□□ -0.39
USP9XQ93008 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
USP9XQ93008 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC12.6□□□□□ -0.39
USP9XQ93008 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC12.6□□□□□ -0.39
USP9XQ93008 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
USP9XQ93008 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
USP9XQ93008 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.6□□□□□ -0.39
USP9XQ93008 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC12.6□□□□□ -0.39
USP9XQ93008 ACE-203ENST00000413513 2237 ntTSL 2 BASIC12.6□□□□□ -0.39
USP9XQ93008 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
USP9XQ93008 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
USP9XQ93008 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC12.6□□□□□ -0.39
USP9XQ93008 LTB4R2-202ENST00000528054 3092 ntBASIC12.6□□□□□ -0.39
USP9XQ93008 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
USP9XQ93008 AC011997.1-201ENST00000409845 1032 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
USP9XQ93008 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC12.6□□□□□ -0.39
USP9XQ93008 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC12.6□□□□□ -0.39
USP9XQ93008 MIR4746-201ENST00000579802 71 ntBASIC12.6□□□□□ -0.39
USP9XQ93008 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
USP9XQ93008 AP002414.2-201ENST00000591780 3365 ntBASIC12.6□□□□□ -0.39
USP9XQ93008 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC12.6□□□□□ -0.39
USP9XQ93008 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
USP9XQ93008 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
USP9XQ93008 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
USP9XQ93008 AC117503.4-201ENST00000623229 1418 ntBASIC12.6□□□□□ -0.39
USP9XQ93008 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9XQ93008 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
USP9XQ93008 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9XQ93008 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
USP9XQ93008 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms