Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 OR4C6-201ENST00000314259 1020 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 AL356488.1-201ENST00000429752 609 ntBASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 ENTPD1-AS1-210ENST00000452942 864 ntTSL 3 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 CLDN16-202ENST00000456423 430 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 AC012574.1-201ENST00000523874 252 ntTSL 5 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 AC010326.4-201ENST00000604665 891 ntBASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 AC009061.2-203ENST00000635000 1462 ntTSL 5 BASIC5.71□□□□□ -1.49
SYNE2Q8WXH0 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SYNE2Q8WXH0 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC5.71□□□□□ -1.49
SYNE2Q8WXH0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
SYNE2Q8WXH0 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC5.71□□□□□ -1.49
SYNE2Q8WXH0 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC5.71□□□□□ -1.49
SYNE2Q8WXH0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SYNE2Q8WXH0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
SYNE2Q8WXH0 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SYNE2Q8WXH0 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
SYNE2Q8WXH0 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC5.71□□□□□ -1.49
SYNE2Q8WXH0 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SYNE2Q8WXH0 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SYNE2Q8WXH0 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC5.71□□□□□ -1.49
SYNE2Q8WXH0 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC5.71□□□□□ -1.49
SYNE2Q8WXH0 RPSAP70-201ENST00000504462 864 ntBASIC5.71□□□□□ -1.49
SYNE2Q8WXH0 AC100858.1-201ENST00000514059 1228 ntBASIC5.71□□□□□ -1.49
SYNE2Q8WXH0 AC087441.1-201ENST00000531069 301 ntBASIC5.71□□□□□ -1.49
SYNE2Q8WXH0 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC5.71□□□□□ -1.49
SYNE2Q8WXH0 CBX3P4-202ENST00000540428 423 ntTSL 2 BASIC5.71□□□□□ -1.49
SYNE2Q8WXH0 AC136698.1-201ENST00000558110 546 ntTSL 4 BASIC5.71□□□□□ -1.49
SYNE2Q8WXH0 AC048382.4-201ENST00000559065 546 ntTSL 4 BASIC5.71□□□□□ -1.49
SYNE2Q8WXH0 RN7SL455P-201ENST00000580629 282 ntBASIC5.71□□□□□ -1.49
SYNE2Q8WXH0 AC100778.4-201ENST00000581232 582 ntTSL 4 BASIC5.71□□□□□ -1.49
SYNE2Q8WXH0 AC093072.1-201ENST00000589196 602 ntTSL 4 BASIC5.71□□□□□ -1.49
SYNE2Q8WXH0 AC022150.2-201ENST00000596451 644 ntTSL 3 BASIC5.71□□□□□ -1.49
SYNE2Q8WXH0 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
SYNE2Q8WXH0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
SYNE2Q8WXH0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
SYNE2Q8WXH0 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC5.71□□□□□ -1.49
SYNE2Q8WXH0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
SYNE2Q8WXH0 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC5.71□□□□□ -1.49
SYNE2Q8WXH0 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
SYNE2Q8WXH0 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
SYNE2Q8WXH0 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 TCTE1-201ENST00000371504 616 ntTSL 3 BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 TRAV2-201ENST00000390424 348 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 DAPK1-IT1-201ENST00000431813 702 ntTSL 3 BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 AC097066.1-201ENST00000456878 683 ntTSL 5 BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 AC011092.1-201ENST00000533128 1047 ntBASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 RPL38-206ENST00000533498 532 ntAPPRIS P2 TSL 2 BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 FANCI-214ENST00000567996 1070 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 AC245369.3-201ENST00000624687 411 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 SPDL1-216ENST00000629457 340 ntTSL 5 BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 CROCCP2-202ENST00000412962 2773 ntBASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 VSTM1-202ENST00000366170 654 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 POLR2H-205ENST00000443489 807 ntTSL 2 BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 LAMTOR4-207ENST00000474141 519 ntTSL 2 BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 GAPDHP76-201ENST00000512278 976 ntBASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 LINC00592-201ENST00000549830 1044 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 DYNLL1P2-201ENST00000554807 270 ntBASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 PSMD7-205ENST00000568615 931 ntTSL 2 BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 FAM187B2P-201ENST00000577135 713 ntBASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 AFMID-205ENST00000586731 550 ntTSL 3 BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 AC006547.1-206ENST00000600617 878 ntTSL 5 BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 AC024475.2-201ENST00000312173 879 ntBASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 OR4C5-201ENST00000319813 981 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 PAGE4-202ENST00000376141 487 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 DHRSX-IT1-201ENST00000437244 651 ntTSL 5 BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 ALG1L10P-201ENST00000437882 424 ntBASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 AC025178.1-201ENST00000503441 834 ntTSL 2 BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 AP003419.3-201ENST00000613900 527 ntTSL 3 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms