Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 AL096865.1-201ENST00000606796 927 ntBASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RTN4IP1Q8WWV3 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RTN4IP1Q8WWV3 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
RTN4IP1Q8WWV3 AC016397.2-201ENST00000624848 1985 ntBASIC12.52□□□□□ -0.4
RTN4IP1Q8WWV3 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RTN4IP1Q8WWV3 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.52□□□□□ -0.4
RTN4IP1Q8WWV3 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RTN4IP1Q8WWV3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RTN4IP1Q8WWV3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RTN4IP1Q8WWV3 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.52□□□□□ -0.4
RTN4IP1Q8WWV3 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.52□□□□□ -0.4
RTN4IP1Q8WWV3 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RTN4IP1Q8WWV3 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
RTN4IP1Q8WWV3 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.52□□□□□ -0.4
RTN4IP1Q8WWV3 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.52□□□□□ -0.4
RTN4IP1Q8WWV3 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.52□□□□□ -0.4
RTN4IP1Q8WWV3 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 RN7SL399P-201ENST00000471648 279 ntBASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 CD81-207ENST00000481687 890 ntTSL 2 BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 SERBP1P5-201ENST00000510079 1181 ntBASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 AC055876.2-201ENST00000531834 546 ntBASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 SPCS2P1-201ENST00000561636 679 ntBASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RTN4IP1Q8WWV3 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms