Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC093512.1-201ENST00000617969 520 ntBASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 PPT1-213ENST00000641319 2388 ntBASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.83□□□□□ -0.03
SLC44A1Q8WWI5 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SLC44A1Q8WWI5 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
SLC44A1Q8WWI5 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.83□□□□□ -0.03
SLC44A1Q8WWI5 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
SLC44A1Q8WWI5 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SLC44A1Q8WWI5 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.83□□□□□ -0.03
SLC44A1Q8WWI5 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
SLC44A1Q8WWI5 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SLC44A1Q8WWI5 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.83□□□□□ -0.03
SLC44A1Q8WWI5 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
SLC44A1Q8WWI5 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 FO681548.1-201ENST00000455617 1132 ntBASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 SORD2P-201ENST00000558556 1069 ntBASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 AL359711.2-201ENST00000563105 872 ntBASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.83□□□□□ -0.04
SLC44A1Q8WWI5 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 AC073548.1-201ENST00000624088 1882 ntBASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 AC107918.4-201ENST00000641966 3141 ntBASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms