Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEDD1Q8NHV4 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEDD1Q8NHV4 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC17.06■□□□□ 0.32
NEDD1Q8NHV4 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17.06■□□□□ 0.32
NEDD1Q8NHV4 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.06■□□□□ 0.32
NEDD1Q8NHV4 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC17.06■□□□□ 0.32
NEDD1Q8NHV4 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC17.06■□□□□ 0.32
NEDD1Q8NHV4 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC17.06■□□□□ 0.32
NEDD1Q8NHV4 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
NEDD1Q8NHV4 AC105129.2-201ENST00000559536 390 ntBASIC17.06■□□□□ 0.32
NEDD1Q8NHV4 AC005586.2-201ENST00000563946 837 ntBASIC17.06■□□□□ 0.32
NEDD1Q8NHV4 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NEDD1Q8NHV4 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC17.06■□□□□ 0.32
NEDD1Q8NHV4 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC17.06■□□□□ 0.32
NEDD1Q8NHV4 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC17.06■□□□□ 0.32
NEDD1Q8NHV4 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NEDD1Q8NHV4 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEDD1Q8NHV4 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEDD1Q8NHV4 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEDD1Q8NHV4 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC17.06■□□□□ 0.32
NEDD1Q8NHV4 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NEDD1Q8NHV4 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.06■□□□□ 0.32
NEDD1Q8NHV4 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.06■□□□□ 0.32
NEDD1Q8NHV4 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NEDD1Q8NHV4 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEDD1Q8NHV4 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC17.06■□□□□ 0.32
NEDD1Q8NHV4 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEDD1Q8NHV4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEDD1Q8NHV4 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEDD1Q8NHV4 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEDD1Q8NHV4 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NEDD1Q8NHV4 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEDD1Q8NHV4 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 TSPY25P-201ENST00000429463 745 ntBASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 AL161932.2-201ENST00000435436 679 ntBASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 AC073150.1-201ENST00000450406 1084 ntBASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 UPF3AP2-201ENST00000457924 1132 ntBASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 RN7SL769P-201ENST00000469386 295 ntBASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 RN7SL720P-201ENST00000488178 304 ntBASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 IMP3P2-201ENST00000489760 475 ntBASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 RHOQP1-201ENST00000555758 579 ntBASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 AC020922.3-201ENST00000595064 547 ntBASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 MEG3_2.1-201ENST00000611456 105 ntBASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 AC068587.10-201ENST00000641210 219 ntBASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 LINC01165-201ENST00000445190 1623 ntBASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 AP002414.2-201ENST00000591780 3365 ntBASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NEDD1Q8NHV4 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 AL390755.1-201ENST00000623716 2027 ntBASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms