Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.56□□□□□ -0.08
TRAM1L1Q8N609 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.56□□□□□ -0.08
TRAM1L1Q8N609 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAM1L1Q8N609 AC126915.1-201ENST00000522847 1038 ntBASIC14.56□□□□□ -0.08
TRAM1L1Q8N609 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRAM1L1Q8N609 MIR4538-201ENST00000581377 78 ntBASIC14.56□□□□□ -0.08
TRAM1L1Q8N609 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.56□□□□□ -0.08
TRAM1L1Q8N609 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAM1L1Q8N609 AC005324.6-201ENST00000587972 613 ntBASIC14.56□□□□□ -0.08
TRAM1L1Q8N609 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
TRAM1L1Q8N609 AL118558.3-201ENST00000607414 1079 ntBASIC14.56□□□□□ -0.08
TRAM1L1Q8N609 AL022328.3-201ENST00000607943 679 ntBASIC14.56□□□□□ -0.08
TRAM1L1Q8N609 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAM1L1Q8N609 MIR6074-201ENST00000612054 107 ntBASIC14.56□□□□□ -0.08
TRAM1L1Q8N609 MIR6799-201ENST00000620297 69 ntBASIC14.56□□□□□ -0.08
TRAM1L1Q8N609 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAM1L1Q8N609 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TRAM1L1Q8N609 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAM1L1Q8N609 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAM1L1Q8N609 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAM1L1Q8N609 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.56□□□□□ -0.08
TRAM1L1Q8N609 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAM1L1Q8N609 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAM1L1Q8N609 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAM1L1Q8N609 LINC00552-201ENST00000625151 2579 ntBASIC14.56□□□□□ -0.08
TRAM1L1Q8N609 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TRAM1L1Q8N609 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAM1L1Q8N609 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAM1L1Q8N609 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAM1L1Q8N609 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAM1L1Q8N609 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAM1L1Q8N609 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
TRAM1L1Q8N609 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
TRAM1L1Q8N609 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAM1L1Q8N609 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TRAM1L1Q8N609 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 AC007326.2-201ENST00000624224 7579 ntBASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 AC006033.1-201ENST00000440505 426 ntBASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 AC004898.1-201ENST00000451057 766 ntBASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 RNMTL1P1-201ENST00000454103 560 ntBASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 RBM8B-201ENST00000555532 525 ntBASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 AC027237.1-201ENST00000560942 655 ntBASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 BNIP3P13-201ENST00000599968 566 ntBASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 AC022748.3-201ENST00000621828 275 ntBASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 AC015802.1-201ENST00000588104 1449 ntBASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 AC215219.1-201ENST00000400706 1817 ntBASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRAM1L1Q8N609 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms