Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 AL136172.1-201ENST00000598590 1394 ntBASIC16.45■□□□□ 0.22
TRIM50Q86XT4 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 AC023824.1-201ENST00000562945 2975 ntBASIC16.44■□□□□ 0.22
TRIM50Q86XT4 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 AC144522.1-201ENST00000625111 1658 ntBASIC16.44■□□□□ 0.22
TRIM50Q86XT4 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 AC007274.2-201ENST00000421675 662 ntBASIC16.44■□□□□ 0.22
TRIM50Q86XT4 AC078875.1-201ENST00000431907 724 ntBASIC16.44■□□□□ 0.22
TRIM50Q86XT4 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 AC116345.2-201ENST00000512837 523 ntBASIC16.44■□□□□ 0.22
TRIM50Q86XT4 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 AC090857.1-201ENST00000527400 390 ntBASIC16.44■□□□□ 0.22
TRIM50Q86XT4 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 AC079336.7-201ENST00000623428 1078 ntBASIC16.44■□□□□ 0.22
TRIM50Q86XT4 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 AC022532.1-201ENST00000624563 1728 ntBASIC16.44■□□□□ 0.22
TRIM50Q86XT4 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 AC092384.3-202ENST00000564646 2873 ntBASIC16.44■□□□□ 0.22
TRIM50Q86XT4 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM50Q86XT4 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM50Q86XT4 AC092506.1-202ENST00000401022 528 ntBASIC16.43■□□□□ 0.22
TRIM50Q86XT4 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms