Protein–RNA interactions for Protein: Q7Z4H3

HDDC2, HD domain-containing protein 2, humanhuman

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2Q7Z4H3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
HDDC2Q7Z4H3 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HDDC2Q7Z4H3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HDDC2Q7Z4H3 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.59□□□□□ -0.23
HDDC2Q7Z4H3 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
HDDC2Q7Z4H3 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
HDDC2Q7Z4H3 AC027601.5-201ENST00000624065 2482 ntBASIC13.58□□□□□ -0.23
HDDC2Q7Z4H3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.58□□□□□ -0.23
HDDC2Q7Z4H3 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
HDDC2Q7Z4H3 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 AC123567.1-201ENST00000548294 1261 ntBASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 AC027796.2-201ENST00000575326 344 ntBASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 AL132655.2-201ENST00000596276 594 ntBASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 AC133539.2-201ENST00000604757 467 ntBASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 AC136759.1-202ENST00000530858 2194 ntBASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
HDDC2Q7Z4H3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HDDC2Q7Z4H3 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HDDC2Q7Z4H3 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HDDC2Q7Z4H3 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HDDC2Q7Z4H3 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
HDDC2Q7Z4H3 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HDDC2Q7Z4H3 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
HDDC2Q7Z4H3 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HDDC2Q7Z4H3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.57□□□□□ -0.24
HDDC2Q7Z4H3 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HDDC2Q7Z4H3 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC13.57□□□□□ -0.24
HDDC2Q7Z4H3 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
HDDC2Q7Z4H3 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HDDC2Q7Z4H3 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HDDC2Q7Z4H3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
HDDC2Q7Z4H3 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
HDDC2Q7Z4H3 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
HDDC2Q7Z4H3 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HDDC2Q7Z4H3 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HDDC2Q7Z4H3 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HDDC2Q7Z4H3 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
HDDC2Q7Z4H3 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HDDC2Q7Z4H3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HDDC2Q7Z4H3 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.57□□□□□ -0.24
HDDC2Q7Z4H3 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HDDC2Q7Z4H3 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HDDC2Q7Z4H3 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HDDC2Q7Z4H3 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 3381.2 ms