Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 AL136309.1-201ENST00000403917 691 ntBASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 FAM21FP-201ENST00000426241 1131 ntBASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 YBX1P6-201ENST00000442962 1002 ntBASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 HOMER2P2-201ENST00000451621 847 ntBASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 AL354702.1-201ENST00000442006 1960 ntBASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 MIR4741-201ENST00000579822 90 ntBASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 AL358472.3-201ENST00000608147 415 ntBASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 MRPL37P1-201ENST00000592451 1337 ntBASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD3Q7Z3D4 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms