Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LCA10Q71F78 AP001267.2-201ENST00000532619 2086 ntBASIC8.06□□□□□ -1.12
LCA10Q71F78 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC8.06□□□□□ -1.12
LCA10Q71F78 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC8.06□□□□□ -1.12
LCA10Q71F78 COG4-202ENST00000393612 2756 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
LCA10Q71F78 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC8.05□□□□□ -1.12
LCA10Q71F78 SHMT2-201ENST00000328923 2537 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 MAX-212ENST00000555932 1673 ntTSL 5 BASIC8.05□□□□□ -1.12
LCA10Q71F78 THRAP3-201ENST00000354618 4432 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 LINC02133-202ENST00000569726 2626 ntTSL 2 BASIC8.05□□□□□ -1.12
LCA10Q71F78 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 TSKU-203ENST00000527881 3554 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
LCA10Q71F78 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC8.05□□□□□ -1.12
LCA10Q71F78 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC8.05□□□□□ -1.12
LCA10Q71F78 BCDIN3D-AS1-201ENST00000548872 3078 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC8.05□□□□□ -1.12
LCA10Q71F78 AC023090.2-201ENST00000625182 2110 ntBASIC8.05□□□□□ -1.12
LCA10Q71F78 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
LCA10Q71F78 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
LCA10Q71F78 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC8.05□□□□□ -1.12
LCA10Q71F78 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC8.05□□□□□ -1.12
LCA10Q71F78 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC8.05□□□□□ -1.12
LCA10Q71F78 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC8.05□□□□□ -1.12
LCA10Q71F78 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
LCA10Q71F78 POLL-201ENST00000299206 2670 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
LCA10Q71F78 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 AKR1C7P-201ENST00000305623 895 ntBASIC8.05□□□□□ -1.12
LCA10Q71F78 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
LCA10Q71F78 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC8.05□□□□□ -1.12
LCA10Q71F78 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC8.05□□□□□ -1.12
LCA10Q71F78 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC8.05□□□□□ -1.12
LCA10Q71F78 CD99-202ENST00000381180 530 ntTSL 2 BASIC8.05□□□□□ -1.12
LCA10Q71F78 MRPL20P1-201ENST00000400819 433 ntBASIC8.05□□□□□ -1.12
LCA10Q71F78 UPK3BP1-201ENST00000428678 509 ntBASIC8.05□□□□□ -1.12
LCA10Q71F78 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC8.05□□□□□ -1.12
LCA10Q71F78 TMEM198B-204ENST00000484016 896 ntBASIC8.05□□□□□ -1.12
LCA10Q71F78 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
LCA10Q71F78 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC8.05□□□□□ -1.12
LCA10Q71F78 AC073648.2-201ENST00000510116 352 ntBASIC8.05□□□□□ -1.12
LCA10Q71F78 IGHV3-65-201ENST00000523210 341 ntBASIC8.05□□□□□ -1.12
LCA10Q71F78 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC8.05□□□□□ -1.12
LCA10Q71F78 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC8.05□□□□□ -1.12
LCA10Q71F78 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC8.05□□□□□ -1.12
LCA10Q71F78 RIN3-211ENST00000557762 517 ntTSL 3 BASIC8.05□□□□□ -1.12
LCA10Q71F78 ETFA-208ENST00000559602 792 ntTSL 3 BASIC8.05□□□□□ -1.12
LCA10Q71F78 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
LCA10Q71F78 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC8.05□□□□□ -1.12
LCA10Q71F78 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC8.05□□□□□ -1.12
LCA10Q71F78 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC8.05□□□□□ -1.12
LCA10Q71F78 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC8.05□□□□□ -1.12
LCA10Q71F78 C8orf17-202ENST00000625034 2775 ntBASIC8.05□□□□□ -1.12
LCA10Q71F78 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
LCA10Q71F78 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC8.05□□□□□ -1.12
LCA10Q71F78 AP000437.1-201ENST00000624057 2085 ntBASIC8.05□□□□□ -1.12
LCA10Q71F78 PPP1R18-202ENST00000399199 2853 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 ARHGEF10L-203ENST00000375408 3685 ntTSL 5 BASIC8.05□□□□□ -1.12
LCA10Q71F78 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC8.05□□□□□ -1.12
LCA10Q71F78 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC8.05□□□□□ -1.12
LCA10Q71F78 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC8.05□□□□□ -1.12
LCA10Q71F78 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
LCA10Q71F78 USP3-204ENST00000540797 5474 ntTSL 2 BASIC8.05□□□□□ -1.12
LCA10Q71F78 FBXW11-201ENST00000265094 4342 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 SPCS2-209ENST00000610881 2711 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
LCA10Q71F78 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
LCA10Q71F78 AC113367.3-201ENST00000508316 1912 ntBASIC8.05□□□□□ -1.12
LCA10Q71F78 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC8.05□□□□□ -1.12
LCA10Q71F78 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 CMC2-201ENST00000219400 10301 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC8.05□□□□□ -1.12
LCA10Q71F78 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LCA10Q71F78 C14orf119-201ENST00000319074 3660 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms