Protein–RNA interactions for Protein: Q587I9

SFT2D3, Vesicle transport protein SFT2C, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D3Q587I9 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 C1QBPP1-201ENST00000400117 770 ntBASIC14.54□□□□□ -0.08
SFT2D3Q587I9 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 AC007389.4-201ENST00000454674 793 ntBASIC14.54□□□□□ -0.08
SFT2D3Q587I9 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.54□□□□□ -0.08
SFT2D3Q587I9 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFT2D3Q587I9 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SFT2D3Q587I9 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.53□□□□□ -0.08
SFT2D3Q587I9 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SFT2D3Q587I9 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
SFT2D3Q587I9 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
SFT2D3Q587I9 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.53□□□□□ -0.08
SFT2D3Q587I9 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.53□□□□□ -0.08
SFT2D3Q587I9 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.53□□□□□ -0.08
SFT2D3Q587I9 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SFT2D3Q587I9 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.53□□□□□ -0.08
SFT2D3Q587I9 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SFT2D3Q587I9 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SFT2D3Q587I9 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SFT2D3Q587I9 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.53□□□□□ -0.08
SFT2D3Q587I9 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SFT2D3Q587I9 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SFT2D3Q587I9 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SFT2D3Q587I9 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SFT2D3Q587I9 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
SFT2D3Q587I9 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
SFT2D3Q587I9 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SFT2D3Q587I9 RPL5P21-201ENST00000404620 815 ntBASIC14.53□□□□□ -0.08
SFT2D3Q587I9 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.53□□□□□ -0.08
SFT2D3Q587I9 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SFT2D3Q587I9 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.53□□□□□ -0.08
SFT2D3Q587I9 AC124283.3-201ENST00000570869 594 ntBASIC14.53□□□□□ -0.08
SFT2D3Q587I9 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
SFT2D3Q587I9 AC010319.3-201ENST00000597028 470 ntBASIC14.53□□□□□ -0.08
SFT2D3Q587I9 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SFT2D3Q587I9 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SFT2D3Q587I9 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SFT2D3Q587I9 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SFT2D3Q587I9 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SFT2D3Q587I9 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SFT2D3Q587I9 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.53□□□□□ -0.08
SFT2D3Q587I9 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SFT2D3Q587I9 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SFT2D3Q587I9 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.53□□□□□ -0.08
SFT2D3Q587I9 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
SFT2D3Q587I9 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
SFT2D3Q587I9 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.52□□□□□ -0.08
SFT2D3Q587I9 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SFT2D3Q587I9 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
SFT2D3Q587I9 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SFT2D3Q587I9 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SFT2D3Q587I9 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SFT2D3Q587I9 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SFT2D3Q587I9 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms