Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PTPN20Q4JDL3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTPN20Q4JDL3 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.52■□□□□ 0.08
PTPN20Q4JDL3 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.52■□□□□ 0.08
PTPN20Q4JDL3 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.52■□□□□ 0.08
PTPN20Q4JDL3 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
PTPN20Q4JDL3 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTPN20Q4JDL3 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PTPN20Q4JDL3 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTPN20Q4JDL3 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.52■□□□□ 0.08
PTPN20Q4JDL3 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PTPN20Q4JDL3 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PTPN20Q4JDL3 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTPN20Q4JDL3 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.52■□□□□ 0.08
PTPN20Q4JDL3 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PTPN20Q4JDL3 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTPN20Q4JDL3 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
PTPN20Q4JDL3 MIR658-201ENST00000385210 100 ntBASIC15.52■□□□□ 0.08
PTPN20Q4JDL3 KRT223P-202ENST00000449164 1292 ntBASIC15.52■□□□□ 0.08
PTPN20Q4JDL3 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PTPN20Q4JDL3 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.52■□□□□ 0.08
PTPN20Q4JDL3 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTPN20Q4JDL3 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.52■□□□□ 0.08
PTPN20Q4JDL3 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTPN20Q4JDL3 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.52■□□□□ 0.08
PTPN20Q4JDL3 AP005482.1-201ENST00000563722 1273 ntBASIC15.52■□□□□ 0.08
PTPN20Q4JDL3 MIR4783-201ENST00000580343 82 ntBASIC15.52■□□□□ 0.08
PTPN20Q4JDL3 AC133552.6-201ENST00000613406 534 ntBASIC15.52■□□□□ 0.08
PTPN20Q4JDL3 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
PTPN20Q4JDL3 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.52■□□□□ 0.07
PTPN20Q4JDL3 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PTPN20Q4JDL3 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PTPN20Q4JDL3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PTPN20Q4JDL3 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.52■□□□□ 0.07
PTPN20Q4JDL3 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PTPN20Q4JDL3 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.52■□□□□ 0.07
PTPN20Q4JDL3 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PTPN20Q4JDL3 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.52■□□□□ 0.07
PTPN20Q4JDL3 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
PTPN20Q4JDL3 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.52■□□□□ 0.07
PTPN20Q4JDL3 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PTPN20Q4JDL3 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PTPN20Q4JDL3 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PTPN20Q4JDL3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.52■□□□□ 0.07
PTPN20Q4JDL3 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
PTPN20Q4JDL3 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
PTPN20Q4JDL3 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
PTPN20Q4JDL3 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PTPN20Q4JDL3 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.52■□□□□ 0.07
PTPN20Q4JDL3 E2F3P2-201ENST00000447755 1422 ntBASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 AC100850.1-201ENST00000506768 649 ntBASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 AC008825.2-201ENST00000603374 718 ntBASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 AC239800.4-201ENST00000603712 296 ntBASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 AC017083.2-201ENST00000608069 979 ntBASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 MIR6074-201ENST00000612054 107 ntBASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 AC027601.3-201ENST00000622907 509 ntBASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.51■□□□□ 0.07
PTPN20Q4JDL3 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms