Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AL645728.2-202ENST00000641679 227 ntBASIC17.18■□□□□ 0.34
CCDC144BQ3MJ40 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC144BQ3MJ40 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CCDC144BQ3MJ40 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC144BQ3MJ40 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC144BQ3MJ40 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC144BQ3MJ40 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
CCDC144BQ3MJ40 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC144BQ3MJ40 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC144BQ3MJ40 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC144BQ3MJ40 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
CCDC144BQ3MJ40 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 EIF4HP1-201ENST00000453115 687 ntBASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 AC105129.2-201ENST00000559536 390 ntBASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC144BQ3MJ40 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 AC016700.1-201ENST00000429424 312 ntBASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 SERPINA13P-202ENST00000478994 924 ntBASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 AC079328.1-201ENST00000560358 952 ntBASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 MIR3619-201ENST00000579667 83 ntBASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 RN7SL190P-201ENST00000582519 257 ntBASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.16■□□□□ 0.34
CCDC144BQ3MJ40 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC144BQ3MJ40 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC144BQ3MJ40 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC144BQ3MJ40 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CCDC144BQ3MJ40 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC144BQ3MJ40 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC144BQ3MJ40 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms