Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 KRT18P28-201ENST00000453838 1332 ntBASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ANKRD55Q3KP44 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 MIR497HG-202ENST00000572453 3838 ntBASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 PON3-203ENST00000427422 894 ntTSL 3 BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 AC092183.1-201ENST00000469884 875 ntBASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 DAD1-205ENST00000543337 501 ntTSL 3 BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 AC009093.7-201ENST00000623853 1223 ntBASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 AL365181.3-201ENST00000605886 3222 ntBASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 HSPA8P5-201ENST00000456928 2069 ntBASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
ANKRD55Q3KP44 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
ANKRD55Q3KP44 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
ANKRD55Q3KP44 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.43
ANKRD55Q3KP44 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.43
ANKRD55Q3KP44 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.33□□□□□ -0.43
ANKRD55Q3KP44 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.43
ANKRD55Q3KP44 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 AC072061.1-201ENST00000569710 2234 ntBASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 RPL30-202ENST00000396070 440 ntTSL 2 BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 LBH-203ENST00000404397 543 ntTSL 4 BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 AC067863.1-201ENST00000494933 530 ntBASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 AC007967.4-201ENST00000614700 386 ntBASIC12.33□□□□□ -0.44
ANKRD55Q3KP44 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms