Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CACNA1BQ00975 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CACNA1BQ00975 CEP83-AS1-201ENST00000623122 2482 ntBASIC13.48□□□□□ -0.25
CACNA1BQ00975 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CACNA1BQ00975 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.48□□□□□ -0.25
CACNA1BQ00975 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CACNA1BQ00975 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CACNA1BQ00975 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CACNA1BQ00975 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CACNA1BQ00975 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CACNA1BQ00975 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.48□□□□□ -0.25
CACNA1BQ00975 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CACNA1BQ00975 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CACNA1BQ00975 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CACNA1BQ00975 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CACNA1BQ00975 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
CACNA1BQ00975 AL157414.3-201ENST00000624276 1954 ntBASIC13.47□□□□□ -0.25
CACNA1BQ00975 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
CACNA1BQ00975 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CACNA1BQ00975 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CACNA1BQ00975 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC13.47□□□□□ -0.25
CACNA1BQ00975 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC13.47□□□□□ -0.25
CACNA1BQ00975 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC13.47□□□□□ -0.25
CACNA1BQ00975 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.47□□□□□ -0.25
CACNA1BQ00975 PRRX2-AS1-201ENST00000440413 429 ntTSL 2 BASIC13.47□□□□□ -0.25
CACNA1BQ00975 KRT19P4-201ENST00000443208 943 ntBASIC13.47□□□□□ -0.25
CACNA1BQ00975 RN7SL838P-201ENST00000481676 295 ntBASIC13.47□□□□□ -0.25
CACNA1BQ00975 AC138035.2-201ENST00000509192 727 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CACNA1BQ00975 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC13.47□□□□□ -0.25
CACNA1BQ00975 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC13.47□□□□□ -0.25
CACNA1BQ00975 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC13.47□□□□□ -0.25
CACNA1BQ00975 AL022334.2-201ENST00000610000 484 ntBASIC13.47□□□□□ -0.25
CACNA1BQ00975 LINC02193-207ENST00000621799 723 ntTSL 5 BASIC13.47□□□□□ -0.25
CACNA1BQ00975 AC069287.1-202ENST00000622626 723 ntTSL 5 BASIC13.47□□□□□ -0.25
CACNA1BQ00975 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CACNA1BQ00975 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CACNA1BQ00975 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CACNA1BQ00975 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CACNA1BQ00975 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CACNA1BQ00975 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CACNA1BQ00975 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CACNA1BQ00975 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CACNA1BQ00975 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CACNA1BQ00975 PYY2-201ENST00000315776 282 ntBASIC13.47□□□□□ -0.25
CACNA1BQ00975 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.47□□□□□ -0.25
CACNA1BQ00975 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC13.47□□□□□ -0.25
CACNA1BQ00975 AC073869.2-201ENST00000417338 1026 ntBASIC13.47□□□□□ -0.25
CACNA1BQ00975 AC005722.1-201ENST00000431878 964 ntBASIC13.47□□□□□ -0.25
CACNA1BQ00975 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC13.47□□□□□ -0.25
CACNA1BQ00975 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC13.47□□□□□ -0.25
CACNA1BQ00975 AC109830.1-203ENST00000506638 467 ntTSL 2 BASIC13.47□□□□□ -0.25
CACNA1BQ00975 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC13.47□□□□□ -0.25
CACNA1BQ00975 ABCC6P1-202ENST00000565118 796 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CACNA1BQ00975 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC13.47□□□□□ -0.25
CACNA1BQ00975 PDLIM1P1-201ENST00000604187 969 ntBASIC13.47□□□□□ -0.25
CACNA1BQ00975 AC022296.3-201ENST00000608823 403 ntBASIC13.47□□□□□ -0.25
CACNA1BQ00975 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.47□□□□□ -0.25
CACNA1BQ00975 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC13.47□□□□□ -0.25
CACNA1BQ00975 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CACNA1BQ00975 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CACNA1BQ00975 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CACNA1BQ00975 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CACNA1BQ00975 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CACNA1BQ00975 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
CACNA1BQ00975 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CACNA1BQ00975 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CACNA1BQ00975 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CACNA1BQ00975 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CACNA1BQ00975 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CACNA1BQ00975 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CACNA1BQ00975 IGFL4-201ENST00000377697 573 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CACNA1BQ00975 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CACNA1BQ00975 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CACNA1BQ00975 RN7SL523P-201ENST00000484401 298 ntBASIC13.46□□□□□ -0.25
CACNA1BQ00975 CD164-210ENST00000512821 964 ntTSL 2 BASIC13.46□□□□□ -0.25
CACNA1BQ00975 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC13.46□□□□□ -0.25
CACNA1BQ00975 RNA5SP406-201ENST00000516106 112 ntBASIC13.46□□□□□ -0.25
CACNA1BQ00975 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC13.46□□□□□ -0.25
CACNA1BQ00975 HNRNPA1P72-201ENST00000529511 967 ntBASIC13.46□□□□□ -0.25
CACNA1BQ00975 MIR6165-201ENST00000614803 84 ntBASIC13.46□□□□□ -0.25
CACNA1BQ00975 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.46□□□□□ -0.25
CACNA1BQ00975 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CACNA1BQ00975 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
CACNA1BQ00975 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CACNA1BQ00975 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CACNA1BQ00975 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CACNA1BQ00975 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CACNA1BQ00975 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CACNA1BQ00975 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CACNA1BQ00975 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CACNA1BQ00975 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
CACNA1BQ00975 AC060834.1-201ENST00000443027 2032 ntBASIC13.46□□□□□ -0.25
CACNA1BQ00975 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CACNA1BQ00975 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CACNA1BQ00975 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CACNA1BQ00975 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CACNA1BQ00975 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CACNA1BQ00975 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.46□□□□□ -0.26
CACNA1BQ00975 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC13.46□□□□□ -0.26
CACNA1BQ00975 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms