Protein–RNA interactions for Protein: Q00610

CLTC, Clathrin heavy chain 1, humanhuman

Known RBP Predictions only

Length 1,675 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCQ00610 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC20.71■□□□□ 0.91
CLTCQ00610 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC20.71■□□□□ 0.91
CLTCQ00610 AC004466.2-201ENST00000614749 516 ntBASIC20.71■□□□□ 0.91
CLTCQ00610 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC20.71■□□□□ 0.91
CLTCQ00610 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.71■□□□□ 0.91
CLTCQ00610 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLTCQ00610 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC20.71■□□□□ 0.91
CLTCQ00610 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC20.71■□□□□ 0.91
CLTCQ00610 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLTCQ00610 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CLTCQ00610 AMT-256ENST00000638063 1783 ntTSL 5 BASIC20.71■□□□□ 0.91
CLTCQ00610 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC20.71■□□□□ 0.91
CLTCQ00610 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CLTCQ00610 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLTCQ00610 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
CLTCQ00610 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
CLTCQ00610 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CLTCQ00610 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
CLTCQ00610 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
CLTCQ00610 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CLTCQ00610 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CLTCQ00610 AC025594.1-201ENST00000469533 543 ntBASIC20.7■□□□□ 0.91
CLTCQ00610 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CLTCQ00610 AC078814.4-201ENST00000546650 327 ntBASIC20.7■□□□□ 0.91
CLTCQ00610 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC20.7■□□□□ 0.91
CLTCQ00610 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
CLTCQ00610 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC20.7■□□□□ 0.91
CLTCQ00610 AL357143.1-203ENST00000639750 881 ntBASIC20.7■□□□□ 0.91
CLTCQ00610 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLTCQ00610 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CLTCQ00610 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLTCQ00610 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLTCQ00610 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
CLTCQ00610 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC20.7■□□□□ 0.9
CLTCQ00610 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC20.7■□□□□ 0.9
CLTCQ00610 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLTCQ00610 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLTCQ00610 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC20.7■□□□□ 0.9
CLTCQ00610 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC20.7■□□□□ 0.9
CLTCQ00610 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLTCQ00610 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLTCQ00610 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC20.7■□□□□ 0.9
CLTCQ00610 AC098657.1-201ENST00000416270 1135 ntBASIC20.7■□□□□ 0.9
CLTCQ00610 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC20.7■□□□□ 0.9
CLTCQ00610 NALT1-202ENST00000450304 437 ntTSL 3 BASIC20.7■□□□□ 0.9
CLTCQ00610 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLTCQ00610 AC142086.5-202ENST00000562500 217 ntBASIC20.7■□□□□ 0.9
CLTCQ00610 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC20.7■□□□□ 0.9
CLTCQ00610 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC20.7■□□□□ 0.9
CLTCQ00610 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLTCQ00610 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLTCQ00610 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC20.69■□□□□ 0.9
CLTCQ00610 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLTCQ00610 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLTCQ00610 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLTCQ00610 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC20.69■□□□□ 0.9
CLTCQ00610 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLTCQ00610 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
CLTCQ00610 SSR4-202ENST00000370085 526 ntTSL 2 BASIC20.69■□□□□ 0.9
CLTCQ00610 HLA-DMA-202ENST00000395303 1007 ntBASIC20.69■□□□□ 0.9
CLTCQ00610 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC20.69■□□□□ 0.9
CLTCQ00610 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLTCQ00610 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC20.69■□□□□ 0.9
CLTCQ00610 TREX1-203ENST00000456089 629 ntTSL 3 BASIC20.69■□□□□ 0.9
CLTCQ00610 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC20.69■□□□□ 0.9
CLTCQ00610 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC20.69■□□□□ 0.9
CLTCQ00610 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLTCQ00610 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC20.69■□□□□ 0.9
CLTCQ00610 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CLTCQ00610 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLTCQ00610 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLTCQ00610 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLTCQ00610 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLTCQ00610 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLTCQ00610 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLTCQ00610 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CLTCQ00610 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLTCQ00610 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC20.68■□□□□ 0.9
CLTCQ00610 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC20.68■□□□□ 0.9
CLTCQ00610 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLTCQ00610 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLTCQ00610 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLTCQ00610 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLTCQ00610 BMF-206ENST00000558774 671 ntTSL 3 BASIC20.68■□□□□ 0.9
CLTCQ00610 MT3-202ENST00000561640 514 ntTSL 3 BASIC20.68■□□□□ 0.9
CLTCQ00610 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC20.68■□□□□ 0.9
CLTCQ00610 NEK4P3-201ENST00000604859 544 ntBASIC20.68■□□□□ 0.9
CLTCQ00610 AC104506.1-201ENST00000609247 429 ntBASIC20.68■□□□□ 0.9
CLTCQ00610 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLTCQ00610 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC20.68■□□□□ 0.9
CLTCQ00610 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLTCQ00610 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLTCQ00610 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLTCQ00610 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLTCQ00610 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLTCQ00610 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC20.68■□□□□ 0.9
CLTCQ00610 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC20.68■□□□□ 0.9
CLTCQ00610 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.67■□□□□ 0.9
CLTCQ00610 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLTCQ00610 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms