Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDK3Q00526 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDK3Q00526 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.48□□□□□ -0.09
CDK3Q00526 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CDK3Q00526 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.48□□□□□ -0.09
CDK3Q00526 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.48□□□□□ -0.09
CDK3Q00526 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CDK3Q00526 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDK3Q00526 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CDK3Q00526 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CDK3Q00526 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDK3Q00526 CYP4F23P-201ENST00000593402 1579 ntBASIC14.48□□□□□ -0.09
CDK3Q00526 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDK3Q00526 TUBBP5-203ENST00000508529 1334 ntBASIC14.48□□□□□ -0.09
CDK3Q00526 AC023824.1-201ENST00000562945 2975 ntBASIC14.48□□□□□ -0.09
CDK3Q00526 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDK3Q00526 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDK3Q00526 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDK3Q00526 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDK3Q00526 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDK3Q00526 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.48□□□□□ -0.09
CDK3Q00526 AL008707.1-201ENST00000422498 534 ntBASIC14.48□□□□□ -0.09
CDK3Q00526 AC009779.1-201ENST00000551138 283 ntBASIC14.48□□□□□ -0.09
CDK3Q00526 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDK3Q00526 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDK3Q00526 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDK3Q00526 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.48□□□□□ -0.09
CDK3Q00526 AC133540.1-201ENST00000620845 1019 ntBASIC14.48□□□□□ -0.09
CDK3Q00526 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDK3Q00526 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
CDK3Q00526 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDK3Q00526 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDK3Q00526 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDK3Q00526 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CDK3Q00526 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDK3Q00526 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDK3Q00526 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDK3Q00526 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CDK3Q00526 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CDK3Q00526 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDK3Q00526 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.48□□□□□ -0.09
CDK3Q00526 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.48□□□□□ -0.09
CDK3Q00526 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.48□□□□□ -0.09
CDK3Q00526 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.48□□□□□ -0.09
CDK3Q00526 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDK3Q00526 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDK3Q00526 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.48□□□□□ -0.09
CDK3Q00526 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDK3Q00526 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDK3Q00526 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDK3Q00526 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDK3Q00526 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDK3Q00526 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDK3Q00526 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDK3Q00526 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDK3Q00526 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CDK3Q00526 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDK3Q00526 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.47□□□□□ -0.09
CDK3Q00526 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDK3Q00526 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDK3Q00526 SPTLC1P5-201ENST00000450718 252 ntBASIC14.47□□□□□ -0.09
CDK3Q00526 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDK3Q00526 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.47□□□□□ -0.09
CDK3Q00526 RCC2P8-201ENST00000502779 1035 ntBASIC14.47□□□□□ -0.09
CDK3Q00526 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDK3Q00526 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.47□□□□□ -0.09
CDK3Q00526 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.47□□□□□ -0.09
CDK3Q00526 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.47□□□□□ -0.09
CDK3Q00526 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.47□□□□□ -0.09
CDK3Q00526 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.47□□□□□ -0.09
CDK3Q00526 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.47□□□□□ -0.09
CDK3Q00526 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.47□□□□□ -0.09
CDK3Q00526 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.47□□□□□ -0.09
CDK3Q00526 AC091544.8-201ENST00000619490 361 ntBASIC14.47□□□□□ -0.09
CDK3Q00526 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.47□□□□□ -0.09
CDK3Q00526 AC100757.4-201ENST00000626934 759 ntBASIC14.47□□□□□ -0.09
CDK3Q00526 AL805961.1-203ENST00000641078 1258 ntBASIC14.47□□□□□ -0.09
CDK3Q00526 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDK3Q00526 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDK3Q00526 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDK3Q00526 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDK3Q00526 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDK3Q00526 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.47□□□□□ -0.09
CDK3Q00526 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDK3Q00526 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDK3Q00526 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDK3Q00526 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.47□□□□□ -0.09
CDK3Q00526 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDK3Q00526 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.47□□□□□ -0.09
CDK3Q00526 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDK3Q00526 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDK3Q00526 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.47□□□□□ -0.09
CDK3Q00526 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.47□□□□□ -0.09
CDK3Q00526 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDK3Q00526 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDK3Q00526 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDK3Q00526 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDK3Q00526 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDK3Q00526 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDK3Q00526 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms