Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SKP1P63208 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.08□□□□□ -0.16
SKP1P63208 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SKP1P63208 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SKP1P63208 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SKP1P63208 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SKP1P63208 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SKP1P63208 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SKP1P63208 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SKP1P63208 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SKP1P63208 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SKP1P63208 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SKP1P63208 AL031595.1-201ENST00000623969 4709 ntBASIC14.07□□□□□ -0.16
SKP1P63208 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SKP1P63208 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SKP1P63208 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SKP1P63208 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SKP1P63208 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SKP1P63208 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SKP1P63208 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SKP1P63208 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC14.07□□□□□ -0.16
SKP1P63208 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SKP1P63208 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SKP1P63208 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.07□□□□□ -0.16
SKP1P63208 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SKP1P63208 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SKP1P63208 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.07□□□□□ -0.16
SKP1P63208 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SKP1P63208 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SKP1P63208 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.07□□□□□ -0.16
SKP1P63208 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.07□□□□□ -0.16
SKP1P63208 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SKP1P63208 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SKP1P63208 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.07□□□□□ -0.16
SKP1P63208 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SKP1P63208 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SKP1P63208 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SKP1P63208 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.07□□□□□ -0.16
SKP1P63208 MTX1P1-201ENST00000440904 838 ntBASIC14.07□□□□□ -0.16
SKP1P63208 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.07□□□□□ -0.16
SKP1P63208 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.07□□□□□ -0.16
SKP1P63208 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SKP1P63208 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.07□□□□□ -0.16
SKP1P63208 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.07□□□□□ -0.16
SKP1P63208 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.07□□□□□ -0.16
SKP1P63208 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.07□□□□□ -0.16
SKP1P63208 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SKP1P63208 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SKP1P63208 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
SKP1P63208 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SKP1P63208 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SKP1P63208 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SKP1P63208 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.07□□□□□ -0.16
SKP1P63208 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SKP1P63208 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.07□□□□□ -0.16
SKP1P63208 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SKP1P63208 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.07□□□□□ -0.16
SKP1P63208 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.07□□□□□ -0.16
SKP1P63208 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.07□□□□□ -0.16
SKP1P63208 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SKP1P63208 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SKP1P63208 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.07□□□□□ -0.16
SKP1P63208 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SKP1P63208 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SKP1P63208 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
SKP1P63208 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.06□□□□□ -0.16
SKP1P63208 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SKP1P63208 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SKP1P63208 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.06□□□□□ -0.16
SKP1P63208 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SKP1P63208 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.06□□□□□ -0.16
SKP1P63208 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SKP1P63208 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SKP1P63208 AC020910.5-201ENST00000623668 1865 ntBASIC14.06□□□□□ -0.16
SKP1P63208 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SKP1P63208 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SKP1P63208 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SKP1P63208 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SKP1P63208 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SKP1P63208 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SKP1P63208 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SKP1P63208 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SKP1P63208 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
SKP1P63208 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SKP1P63208 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SKP1P63208 TNRC18P2-201ENST00000417666 2714 ntBASIC14.06□□□□□ -0.16
SKP1P63208 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
SKP1P63208 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SKP1P63208 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SKP1P63208 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.06□□□□□ -0.16
SKP1P63208 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SKP1P63208 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.06□□□□□ -0.16
SKP1P63208 BTBD6P1-201ENST00000412176 1267 ntBASIC14.06□□□□□ -0.16
SKP1P63208 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.06□□□□□ -0.16
SKP1P63208 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.06□□□□□ -0.16
SKP1P63208 CHMP1AP1-201ENST00000445563 662 ntBASIC14.06□□□□□ -0.16
SKP1P63208 BNIP3P42-201ENST00000454982 569 ntBASIC14.06□□□□□ -0.16
SKP1P63208 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SKP1P63208 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.06□□□□□ -0.16
SKP1P63208 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms