Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.06□□□□□ -0.32
SEC61A1P61619 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
SEC61A1P61619 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SEC61A1P61619 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SEC61A1P61619 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SEC61A1P61619 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SEC61A1P61619 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
SEC61A1P61619 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SEC61A1P61619 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SEC61A1P61619 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SEC61A1P61619 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SEC61A1P61619 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SEC61A1P61619 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SEC61A1P61619 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
SEC61A1P61619 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.06□□□□□ -0.32
SEC61A1P61619 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.06□□□□□ -0.32
SEC61A1P61619 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.06□□□□□ -0.32
SEC61A1P61619 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.06□□□□□ -0.32
SEC61A1P61619 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.06□□□□□ -0.32
SEC61A1P61619 AC104596.2-201ENST00000512793 793 ntBASIC13.06□□□□□ -0.32
SEC61A1P61619 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
SEC61A1P61619 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SEC61A1P61619 CR383656.12-201ENST00000549567 513 ntBASIC13.06□□□□□ -0.32
SEC61A1P61619 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.06□□□□□ -0.32
SEC61A1P61619 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.06□□□□□ -0.32
SEC61A1P61619 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.06□□□□□ -0.32
SEC61A1P61619 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SEC61A1P61619 ACE3P-201ENST00000423435 1973 ntBASIC13.06□□□□□ -0.32
SEC61A1P61619 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SEC61A1P61619 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SEC61A1P61619 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.06□□□□□ -0.32
SEC61A1P61619 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.06□□□□□ -0.32
SEC61A1P61619 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.06□□□□□ -0.32
SEC61A1P61619 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SEC61A1P61619 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.06□□□□□ -0.32
SEC61A1P61619 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SEC61A1P61619 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
SEC61A1P61619 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.06□□□□□ -0.32
SEC61A1P61619 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.06□□□□□ -0.32
SEC61A1P61619 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SEC61A1P61619 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SEC61A1P61619 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SEC61A1P61619 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SEC61A1P61619 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SEC61A1P61619 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SEC61A1P61619 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SEC61A1P61619 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SEC61A1P61619 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.06□□□□□ -0.32
SEC61A1P61619 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SEC61A1P61619 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SEC61A1P61619 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SEC61A1P61619 AL031595.1-201ENST00000623969 4709 ntBASIC13.05□□□□□ -0.32
SEC61A1P61619 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SEC61A1P61619 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
SEC61A1P61619 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.05□□□□□ -0.32
SEC61A1P61619 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.05□□□□□ -0.32
SEC61A1P61619 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
SEC61A1P61619 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SEC61A1P61619 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SEC61A1P61619 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SEC61A1P61619 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SEC61A1P61619 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.05□□□□□ -0.32
SEC61A1P61619 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
SEC61A1P61619 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SEC61A1P61619 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.05□□□□□ -0.32
SEC61A1P61619 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
SEC61A1P61619 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SEC61A1P61619 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.05□□□□□ -0.32
SEC61A1P61619 TOMM22P5-201ENST00000416399 439 ntBASIC13.05□□□□□ -0.32
SEC61A1P61619 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.05□□□□□ -0.32
SEC61A1P61619 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.05□□□□□ -0.32
SEC61A1P61619 RN7SL837P-201ENST00000463010 287 ntBASIC13.05□□□□□ -0.32
SEC61A1P61619 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SEC61A1P61619 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SEC61A1P61619 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.05□□□□□ -0.32
SEC61A1P61619 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.05□□□□□ -0.32
SEC61A1P61619 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
SEC61A1P61619 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SEC61A1P61619 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.05□□□□□ -0.32
SEC61A1P61619 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.05□□□□□ -0.32
SEC61A1P61619 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
SEC61A1P61619 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
SEC61A1P61619 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
SEC61A1P61619 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SEC61A1P61619 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SEC61A1P61619 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.05□□□□□ -0.32
SEC61A1P61619 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
SEC61A1P61619 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.05□□□□□ -0.32
SEC61A1P61619 CICP11-201ENST00000434745 2827 ntBASIC13.05□□□□□ -0.32
SEC61A1P61619 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SEC61A1P61619 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SEC61A1P61619 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SEC61A1P61619 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SEC61A1P61619 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.05□□□□□ -0.32
SEC61A1P61619 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.05□□□□□ -0.32
SEC61A1P61619 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.05□□□□□ -0.32
SEC61A1P61619 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SEC61A1P61619 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.05□□□□□ -0.32
SEC61A1P61619 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SEC61A1P61619 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms