Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CXCR4P61073 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.51□□□□□ -0.25
CXCR4P61073 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CXCR4P61073 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CXCR4P61073 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CXCR4P61073 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CXCR4P61073 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CXCR4P61073 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.51□□□□□ -0.25
CXCR4P61073 AC211486.1-202ENST00000416371 468 ntBASIC13.51□□□□□ -0.25
CXCR4P61073 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.51□□□□□ -0.25
CXCR4P61073 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.51□□□□□ -0.25
CXCR4P61073 AC211476.1-201ENST00000503899 468 ntBASIC13.51□□□□□ -0.25
CXCR4P61073 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CXCR4P61073 AC069262.1-201ENST00000539058 672 ntBASIC13.51□□□□□ -0.25
CXCR4P61073 AC010336.2-201ENST00000564226 506 ntBASIC13.51□□□□□ -0.25
CXCR4P61073 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CXCR4P61073 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.51□□□□□ -0.25
CXCR4P61073 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.51□□□□□ -0.25
CXCR4P61073 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CXCR4P61073 SPDYE12P-201ENST00000618416 771 ntBASIC13.51□□□□□ -0.25
CXCR4P61073 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.51□□□□□ -0.25
CXCR4P61073 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
CXCR4P61073 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CXCR4P61073 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CXCR4P61073 Z82170.1-201ENST00000625081 3192 ntBASIC13.51□□□□□ -0.25
CXCR4P61073 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.51□□□□□ -0.25
CXCR4P61073 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CXCR4P61073 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CXCR4P61073 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CXCR4P61073 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CXCR4P61073 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CXCR4P61073 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CXCR4P61073 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.51□□□□□ -0.25
CXCR4P61073 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CXCR4P61073 AC135782.3-201ENST00000562782 2105 ntBASIC13.51□□□□□ -0.25
CXCR4P61073 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CXCR4P61073 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CXCR4P61073 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.5□□□□□ -0.25
CXCR4P61073 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CXCR4P61073 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CXCR4P61073 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CXCR4P61073 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CXCR4P61073 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.5□□□□□ -0.25
CXCR4P61073 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CXCR4P61073 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CXCR4P61073 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CXCR4P61073 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CXCR4P61073 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CXCR4P61073 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CXCR4P61073 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CXCR4P61073 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CXCR4P61073 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CXCR4P61073 AL157996.1-201ENST00000624684 2299 ntBASIC13.5□□□□□ -0.25
CXCR4P61073 AC093525.8-201ENST00000624099 1342 ntBASIC13.5□□□□□ -0.25
CXCR4P61073 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CXCR4P61073 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CXCR4P61073 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CXCR4P61073 RPSAP43-201ENST00000402237 625 ntBASIC13.5□□□□□ -0.25
CXCR4P61073 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.5□□□□□ -0.25
CXCR4P61073 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.5□□□□□ -0.25
CXCR4P61073 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.5□□□□□ -0.25
CXCR4P61073 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CXCR4P61073 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.5□□□□□ -0.25
CXCR4P61073 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CXCR4P61073 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.5□□□□□ -0.25
CXCR4P61073 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.5□□□□□ -0.25
CXCR4P61073 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.5□□□□□ -0.25
CXCR4P61073 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.5□□□□□ -0.25
CXCR4P61073 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.5□□□□□ -0.25
CXCR4P61073 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CXCR4P61073 AC011498.7-201ENST00000624986 2027 ntBASIC13.5□□□□□ -0.25
CXCR4P61073 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CXCR4P61073 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CXCR4P61073 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CXCR4P61073 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
CXCR4P61073 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
CXCR4P61073 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CXCR4P61073 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CXCR4P61073 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CXCR4P61073 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.5□□□□□ -0.25
CXCR4P61073 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.5□□□□□ -0.25
CXCR4P61073 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CXCR4P61073 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CXCR4P61073 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CXCR4P61073 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CXCR4P61073 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CXCR4P61073 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
CXCR4P61073 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.5□□□□□ -0.25
CXCR4P61073 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CXCR4P61073 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CXCR4P61073 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CXCR4P61073 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CXCR4P61073 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CXCR4P61073 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
CXCR4P61073 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CXCR4P61073 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CXCR4P61073 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
CXCR4P61073 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CXCR4P61073 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CXCR4P61073 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms