Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
CDC42P60953 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.59□□□□□ -0.23
CDC42P60953 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.59□□□□□ -0.23
CDC42P60953 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.59□□□□□ -0.23
CDC42P60953 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42P60953 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42P60953 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CDC42P60953 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42P60953 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42P60953 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
CDC42P60953 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.23
CDC42P60953 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
CDC42P60953 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.58□□□□□ -0.23
CDC42P60953 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
CDC42P60953 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
CDC42P60953 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.23
CDC42P60953 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42P60953 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
CDC42P60953 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.58□□□□□ -0.24
CDC42P60953 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42P60953 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.58□□□□□ -0.24
CDC42P60953 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.58□□□□□ -0.24
CDC42P60953 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.58□□□□□ -0.24
CDC42P60953 AC215219.1-201ENST00000400706 1817 ntBASIC13.58□□□□□ -0.24
CDC42P60953 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42P60953 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42P60953 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42P60953 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42P60953 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42P60953 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42P60953 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42P60953 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42P60953 AC004461.1-201ENST00000412461 403 ntBASIC13.58□□□□□ -0.24
CDC42P60953 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.58□□□□□ -0.24
CDC42P60953 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42P60953 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42P60953 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
CDC42P60953 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.58□□□□□ -0.24
CDC42P60953 GAPDHP40-201ENST00000505218 1006 ntBASIC13.58□□□□□ -0.24
CDC42P60953 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42P60953 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.58□□□□□ -0.24
CDC42P60953 AC093520.2-201ENST00000561830 333 ntBASIC13.58□□□□□ -0.24
CDC42P60953 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42P60953 AC092364.2-202ENST00000597012 1073 ntBASIC13.58□□□□□ -0.24
CDC42P60953 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.58□□□□□ -0.24
CDC42P60953 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.58□□□□□ -0.24
CDC42P60953 AC009093.7-201ENST00000623853 1223 ntBASIC13.58□□□□□ -0.24
CDC42P60953 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CDC42P60953 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42P60953 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.58□□□□□ -0.24
CDC42P60953 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42P60953 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.58□□□□□ -0.24
CDC42P60953 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42P60953 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42P60953 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42P60953 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42P60953 COL6A4P2-202ENST00000504443 2753 ntBASIC13.58□□□□□ -0.24
CDC42P60953 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42P60953 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.58□□□□□ -0.24
CDC42P60953 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42P60953 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42P60953 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42P60953 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42P60953 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.58□□□□□ -0.24
CDC42P60953 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42P60953 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42P60953 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42P60953 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42P60953 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.57□□□□□ -0.24
CDC42P60953 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.57□□□□□ -0.24
CDC42P60953 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.57□□□□□ -0.24
CDC42P60953 AL591122.2-201ENST00000624125 1853 ntBASIC13.57□□□□□ -0.24
CDC42P60953 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42P60953 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
CDC42P60953 AC005562.1-201ENST00000583030 3219 ntBASIC13.57□□□□□ -0.24
CDC42P60953 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.57□□□□□ -0.24
CDC42P60953 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42P60953 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.57□□□□□ -0.24
CDC42P60953 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.57□□□□□ -0.24
CDC42P60953 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42P60953 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42P60953 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42P60953 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42P60953 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.57□□□□□ -0.24
CDC42P60953 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.57□□□□□ -0.24
CDC42P60953 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42P60953 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CDC42P60953 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42P60953 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.57□□□□□ -0.24
CDC42P60953 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.57□□□□□ -0.24
CDC42P60953 PGAM5P1-201ENST00000518923 814 ntBASIC13.57□□□□□ -0.24
CDC42P60953 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.57□□□□□ -0.24
CDC42P60953 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CDC42P60953 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.57□□□□□ -0.24
CDC42P60953 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.57□□□□□ -0.24
CDC42P60953 TIMM17BP1-201ENST00000545713 516 ntBASIC13.57□□□□□ -0.24
CDC42P60953 AC051619.7-201ENST00000568314 623 ntBASIC13.57□□□□□ -0.24
CDC42P60953 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.57□□□□□ -0.24
CDC42P60953 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42P60953 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms