Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.63□□□□□ -0.23
CLDN20P56880 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.63□□□□□ -0.23
CLDN20P56880 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.63□□□□□ -0.23
CLDN20P56880 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN20P56880 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN20P56880 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN20P56880 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN20P56880 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.63□□□□□ -0.23
CLDN20P56880 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN20P56880 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN20P56880 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN20P56880 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN20P56880 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.63□□□□□ -0.23
CLDN20P56880 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
CLDN20P56880 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.63□□□□□ -0.23
CLDN20P56880 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CLDN20P56880 AC026434.2-201ENST00000506094 1078 ntBASIC13.63□□□□□ -0.23
CLDN20P56880 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN20P56880 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.63□□□□□ -0.23
CLDN20P56880 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CLDN20P56880 DUX4L47-201ENST00000566374 394 ntBASIC13.63□□□□□ -0.23
CLDN20P56880 RN7SL48P-201ENST00000579283 293 ntBASIC13.63□□□□□ -0.23
CLDN20P56880 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.63□□□□□ -0.23
CLDN20P56880 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.63□□□□□ -0.23
CLDN20P56880 ECM1P1-201ENST00000604092 1279 ntBASIC13.63□□□□□ -0.23
CLDN20P56880 AC138951.2-201ENST00000623455 1161 ntBASIC13.63□□□□□ -0.23
CLDN20P56880 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN20P56880 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN20P56880 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN20P56880 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CLDN20P56880 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN20P56880 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.63□□□□□ -0.23
CLDN20P56880 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.63□□□□□ -0.23
CLDN20P56880 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
CLDN20P56880 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN20P56880 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.63□□□□□ -0.23
CLDN20P56880 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.63□□□□□ -0.23
CLDN20P56880 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.63□□□□□ -0.23
CLDN20P56880 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN20P56880 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN20P56880 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN20P56880 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
CLDN20P56880 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
CLDN20P56880 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.63□□□□□ -0.23
CLDN20P56880 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN20P56880 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CLDN20P56880 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CLDN20P56880 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN20P56880 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN20P56880 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CLDN20P56880 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.63□□□□□ -0.23
CLDN20P56880 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.62□□□□□ -0.23
CLDN20P56880 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CLDN20P56880 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN20P56880 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN20P56880 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN20P56880 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN20P56880 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.62□□□□□ -0.23
CLDN20P56880 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN20P56880 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN20P56880 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CLDN20P56880 LILRP1-201ENST00000444199 1370 ntBASIC13.62□□□□□ -0.23
CLDN20P56880 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN20P56880 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
CLDN20P56880 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN20P56880 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN20P56880 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN20P56880 INTS4P1-203ENST00000641008 3683 ntBASIC13.62□□□□□ -0.23
CLDN20P56880 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN20P56880 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN20P56880 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN20P56880 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN20P56880 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN20P56880 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.62□□□□□ -0.23
CLDN20P56880 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN20P56880 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
CLDN20P56880 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN20P56880 AC026954.1-201ENST00000429771 1293 ntBASIC13.62□□□□□ -0.23
CLDN20P56880 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CLDN20P56880 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN20P56880 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN20P56880 RNA5SP486-201ENST00000515961 83 ntBASIC13.62□□□□□ -0.23
CLDN20P56880 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.62□□□□□ -0.23
CLDN20P56880 AC004466.1-201ENST00000599515 1080 ntBASIC13.62□□□□□ -0.23
CLDN20P56880 ENPP7P14-201ENST00000621765 1040 ntBASIC13.62□□□□□ -0.23
CLDN20P56880 RHOXF1P1-202ENST00000635473 501 ntBASIC13.62□□□□□ -0.23
CLDN20P56880 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN20P56880 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN20P56880 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CLDN20P56880 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.62□□□□□ -0.23
CLDN20P56880 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN20P56880 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
CLDN20P56880 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN20P56880 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN20P56880 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN20P56880 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.62□□□□□ -0.23
CLDN20P56880 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN20P56880 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CLDN20P56880 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.62□□□□□ -0.23
CLDN20P56880 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms