Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
KCNQ4P56696 MROH4P-201ENST00000431302 1578 ntBASIC18.5■□□□□ 0.55
KCNQ4P56696 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC18.5■□□□□ 0.55
KCNQ4P56696 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KCNQ4P56696 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
KCNQ4P56696 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
KCNQ4P56696 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC18.5■□□□□ 0.55
KCNQ4P56696 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
KCNQ4P56696 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KCNQ4P56696 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KCNQ4P56696 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC18.49■□□□□ 0.55
KCNQ4P56696 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC18.49■□□□□ 0.55
KCNQ4P56696 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC18.49■□□□□ 0.55
KCNQ4P56696 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
KCNQ4P56696 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KCNQ4P56696 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KCNQ4P56696 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC18.49■□□□□ 0.55
KCNQ4P56696 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.49■□□□□ 0.55
KCNQ4P56696 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.49■□□□□ 0.55
KCNQ4P56696 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
KCNQ4P56696 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
KCNQ4P56696 UROS-201ENST00000368774 744 ntTSL 2 BASIC18.49■□□□□ 0.55
KCNQ4P56696 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KCNQ4P56696 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC18.49■□□□□ 0.55
KCNQ4P56696 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC18.49■□□□□ 0.55
KCNQ4P56696 AC026470.1-201ENST00000478038 846 ntBASIC18.49■□□□□ 0.55
KCNQ4P56696 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC18.49■□□□□ 0.55
KCNQ4P56696 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KCNQ4P56696 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC18.49■□□□□ 0.55
KCNQ4P56696 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KCNQ4P56696 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC18.49■□□□□ 0.55
KCNQ4P56696 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC18.49■□□□□ 0.55
KCNQ4P56696 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC18.49■□□□□ 0.55
KCNQ4P56696 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
KCNQ4P56696 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KCNQ4P56696 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
KCNQ4P56696 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
KCNQ4P56696 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KCNQ4P56696 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
KCNQ4P56696 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
KCNQ4P56696 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC18.49■□□□□ 0.55
KCNQ4P56696 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KCNQ4P56696 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC18.49■□□□□ 0.55
KCNQ4P56696 ENPP7P8-202ENST00000527856 1345 ntBASIC18.49■□□□□ 0.55
KCNQ4P56696 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
KCNQ4P56696 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.48■□□□□ 0.55
KCNQ4P56696 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
KCNQ4P56696 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.48■□□□□ 0.55
KCNQ4P56696 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
KCNQ4P56696 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
KCNQ4P56696 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
KCNQ4P56696 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KCNQ4P56696 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KCNQ4P56696 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
KCNQ4P56696 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KCNQ4P56696 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KCNQ4P56696 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC18.48■□□□□ 0.55
KCNQ4P56696 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
KCNQ4P56696 SAT1-201ENST00000379251 801 ntTSL 2 BASIC18.48■□□□□ 0.55
KCNQ4P56696 SAT1-202ENST00000379253 909 ntTSL 2 BASIC18.48■□□□□ 0.55
KCNQ4P56696 SAT1-203ENST00000379254 868 ntTSL 3 BASIC18.48■□□□□ 0.55
KCNQ4P56696 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KCNQ4P56696 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC18.48■□□□□ 0.55
KCNQ4P56696 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
KCNQ4P56696 HNRNPA1P58-201ENST00000403629 610 ntBASIC18.48■□□□□ 0.55
KCNQ4P56696 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.48■□□□□ 0.55
KCNQ4P56696 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC18.48■□□□□ 0.55
KCNQ4P56696 HLA-DPA2-205ENST00000433582 733 ntBASIC18.48■□□□□ 0.55
KCNQ4P56696 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC18.48■□□□□ 0.55
KCNQ4P56696 RN7SL23P-201ENST00000484055 275 ntBASIC18.48■□□□□ 0.55
KCNQ4P56696 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC18.48■□□□□ 0.55
KCNQ4P56696 NAA40-205ENST00000539656 577 ntTSL 4 BASIC18.48■□□□□ 0.55
KCNQ4P56696 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC18.48■□□□□ 0.55
KCNQ4P56696 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC18.48■□□□□ 0.55
KCNQ4P56696 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC18.48■□□□□ 0.55
KCNQ4P56696 RPS5-204ENST00000598098 536 ntTSL 2 BASIC18.48■□□□□ 0.55
KCNQ4P56696 AC006483.2-201ENST00000609813 515 ntBASIC18.48■□□□□ 0.55
KCNQ4P56696 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC18.48■□□□□ 0.55
KCNQ4P56696 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KCNQ4P56696 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
KCNQ4P56696 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
KCNQ4P56696 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KCNQ4P56696 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
KCNQ4P56696 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC18.48■□□□□ 0.55
KCNQ4P56696 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.48■□□□□ 0.55
KCNQ4P56696 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
KCNQ4P56696 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
KCNQ4P56696 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC18.48■□□□□ 0.55
KCNQ4P56696 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KCNQ4P56696 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
KCNQ4P56696 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
KCNQ4P56696 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KCNQ4P56696 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
KCNQ4P56696 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
KCNQ4P56696 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC18.47■□□□□ 0.55
KCNQ4P56696 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
KCNQ4P56696 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KCNQ4P56696 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
KCNQ4P56696 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KCNQ4P56696 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms