Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRPF1P55201 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BRPF1P55201 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRPF1P55201 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
BRPF1P55201 E2F3P2-201ENST00000447755 1422 ntBASIC18.76■□□□□ 0.59
BRPF1P55201 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC18.76■□□□□ 0.59
BRPF1P55201 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRPF1P55201 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRPF1P55201 R3HDM2P2-201ENST00000401880 2116 ntBASIC18.76■□□□□ 0.59
BRPF1P55201 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BRPF1P55201 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BRPF1P55201 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRPF1P55201 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRPF1P55201 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
BRPF1P55201 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC18.76■□□□□ 0.59
BRPF1P55201 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BRPF1P55201 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BRPF1P55201 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRPF1P55201 GAS5-209ENST00000430245 723 ntTSL 3 BASIC18.76■□□□□ 0.59
BRPF1P55201 SKA2-202ENST00000437036 625 ntTSL 2 BASIC18.76■□□□□ 0.59
BRPF1P55201 ACR-203ENST00000529621 708 ntTSL 5 BASIC18.76■□□□□ 0.59
BRPF1P55201 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC18.76■□□□□ 0.59
BRPF1P55201 SPCS2P2-201ENST00000603270 608 ntBASIC18.76■□□□□ 0.59
BRPF1P55201 PRKN-211ENST00000615065 261 ntTSL 5 BASIC18.76■□□□□ 0.59
BRPF1P55201 AL008638.5-201ENST00000623814 1298 ntBASIC18.76■□□□□ 0.59
BRPF1P55201 AL162426.1-201ENST00000624141 743 ntBASIC18.76■□□□□ 0.59
BRPF1P55201 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BRPF1P55201 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BRPF1P55201 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRPF1P55201 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC18.76■□□□□ 0.59
BRPF1P55201 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRPF1P55201 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC18.76■□□□□ 0.59
BRPF1P55201 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRPF1P55201 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC18.76■□□□□ 0.59
BRPF1P55201 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC18.76■□□□□ 0.59
BRPF1P55201 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BRPF1P55201 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BRPF1P55201 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BRPF1P55201 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC18.75■□□□□ 0.59
BRPF1P55201 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
BRPF1P55201 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
BRPF1P55201 AC015818.8-201ENST00000587907 1519 ntBASIC18.75■□□□□ 0.59
BRPF1P55201 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
BRPF1P55201 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC18.75■□□□□ 0.59
BRPF1P55201 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC18.75■□□□□ 0.59
BRPF1P55201 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BRPF1P55201 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC18.75■□□□□ 0.59
BRPF1P55201 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
BRPF1P55201 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC18.75■□□□□ 0.59
BRPF1P55201 HSPB1P2-201ENST00000448722 546 ntBASIC18.75■□□□□ 0.59
BRPF1P55201 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BRPF1P55201 EIF4HP1-201ENST00000453115 687 ntBASIC18.75■□□□□ 0.59
BRPF1P55201 TMEM198B-204ENST00000484016 896 ntBASIC18.75■□□□□ 0.59
BRPF1P55201 RNF41-210ENST00000552244 716 ntTSL 3 BASIC18.75■□□□□ 0.59
BRPF1P55201 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC18.75■□□□□ 0.59
BRPF1P55201 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
BRPF1P55201 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC18.75■□□□□ 0.59
BRPF1P55201 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC18.75■□□□□ 0.59
BRPF1P55201 Z98259.2-201ENST00000641583 609 ntBASIC18.75■□□□□ 0.59
BRPF1P55201 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
BRPF1P55201 KRT8P19-201ENST00000551916 1455 ntBASIC18.75■□□□□ 0.59
BRPF1P55201 AC020910.6-201ENST00000623084 1459 ntBASIC18.75■□□□□ 0.59
BRPF1P55201 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
BRPF1P55201 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BRPF1P55201 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BRPF1P55201 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC18.75■□□□□ 0.59
BRPF1P55201 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BRPF1P55201 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
BRPF1P55201 AC064801.2-201ENST00000625052 1303 ntBASIC18.74■□□□□ 0.59
BRPF1P55201 GRN-222ENST00000639447 1314 ntTSL 2 BASIC18.74■□□□□ 0.59
BRPF1P55201 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC18.74■□□□□ 0.59
BRPF1P55201 TMBIM7P-202ENST00000641474 1516 ntBASIC18.74■□□□□ 0.59
BRPF1P55201 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRPF1P55201 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
BRPF1P55201 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRPF1P55201 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRPF1P55201 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
BRPF1P55201 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
BRPF1P55201 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC18.74■□□□□ 0.59
BRPF1P55201 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BRPF1P55201 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRPF1P55201 RPS3-201ENST00000278572 907 ntTSL 3 BASIC18.74■□□□□ 0.59
BRPF1P55201 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BRPF1P55201 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BRPF1P55201 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BRPF1P55201 HNRNPA1P27-201ENST00000412087 955 ntBASIC18.74■□□□□ 0.59
BRPF1P55201 AL161932.2-201ENST00000435436 679 ntBASIC18.74■□□□□ 0.59
BRPF1P55201 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC18.74■□□□□ 0.59
BRPF1P55201 AC005077.2-201ENST00000449786 690 ntBASIC18.74■□□□□ 0.59
BRPF1P55201 AC091804.1-201ENST00000486888 567 ntBASIC18.74■□□□□ 0.59
BRPF1P55201 ADM-202ENST00000524948 584 ntTSL 2 BASIC18.74■□□□□ 0.59
BRPF1P55201 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC18.74■□□□□ 0.59
BRPF1P55201 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRPF1P55201 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
BRPF1P55201 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
BRPF1P55201 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRPF1P55201 AL009178.2-201ENST00000597278 2719 ntBASIC18.74■□□□□ 0.59
BRPF1P55201 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRPF1P55201 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRPF1P55201 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms