Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.92□□□□□ -0.34
ATP1B3P54709 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATP1B3P54709 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.92□□□□□ -0.34
ATP1B3P54709 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.92□□□□□ -0.34
ATP1B3P54709 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
ATP1B3P54709 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ATP1B3P54709 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.92□□□□□ -0.34
ATP1B3P54709 PRSS30P-206ENST00000641773 873 ntBASIC12.92□□□□□ -0.34
ATP1B3P54709 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ATP1B3P54709 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
ATP1B3P54709 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATP1B3P54709 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATP1B3P54709 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATP1B3P54709 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATP1B3P54709 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATP1B3P54709 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ATP1B3P54709 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.92□□□□□ -0.34
ATP1B3P54709 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
ATP1B3P54709 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.92□□□□□ -0.34
ATP1B3P54709 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
ATP1B3P54709 AC055811.4-201ENST00000624039 1754 ntBASIC12.92□□□□□ -0.34
ATP1B3P54709 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
ATP1B3P54709 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
ATP1B3P54709 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.91□□□□□ -0.34
ATP1B3P54709 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ATP1B3P54709 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATP1B3P54709 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
ATP1B3P54709 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.91□□□□□ -0.34
ATP1B3P54709 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATP1B3P54709 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ATP1B3P54709 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.91□□□□□ -0.34
ATP1B3P54709 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.91□□□□□ -0.34
ATP1B3P54709 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ATP1B3P54709 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
ATP1B3P54709 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.91□□□□□ -0.34
ATP1B3P54709 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATP1B3P54709 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.91□□□□□ -0.34
ATP1B3P54709 AC015802.1-201ENST00000588104 1449 ntBASIC12.91□□□□□ -0.34
ATP1B3P54709 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ATP1B3P54709 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
ATP1B3P54709 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.91□□□□□ -0.34
ATP1B3P54709 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATP1B3P54709 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.91□□□□□ -0.34
ATP1B3P54709 C1QBPP1-201ENST00000400117 770 ntBASIC12.91□□□□□ -0.34
ATP1B3P54709 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC12.91□□□□□ -0.34
ATP1B3P54709 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC12.91□□□□□ -0.34
ATP1B3P54709 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.91□□□□□ -0.34
ATP1B3P54709 AC022616.1-201ENST00000518688 554 ntBASIC12.91□□□□□ -0.34
ATP1B3P54709 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.91□□□□□ -0.34
ATP1B3P54709 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATP1B3P54709 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ATP1B3P54709 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
ATP1B3P54709 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.91□□□□□ -0.34
ATP1B3P54709 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.91□□□□□ -0.34
ATP1B3P54709 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.91□□□□□ -0.34
ATP1B3P54709 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATP1B3P54709 AC099568.2-201ENST00000609194 695 ntBASIC12.91□□□□□ -0.34
ATP1B3P54709 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
ATP1B3P54709 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATP1B3P54709 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.91□□□□□ -0.34
ATP1B3P54709 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.91□□□□□ -0.34
ATP1B3P54709 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.91□□□□□ -0.34
ATP1B3P54709 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.91□□□□□ -0.34
ATP1B3P54709 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATP1B3P54709 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
ATP1B3P54709 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATP1B3P54709 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATP1B3P54709 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ATP1B3P54709 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ATP1B3P54709 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATP1B3P54709 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATP1B3P54709 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.91□□□□□ -0.34
ATP1B3P54709 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
ATP1B3P54709 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.91□□□□□ -0.34
ATP1B3P54709 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATP1B3P54709 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ATP1B3P54709 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATP1B3P54709 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATP1B3P54709 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATP1B3P54709 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.91□□□□□ -0.34
ATP1B3P54709 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.9□□□□□ -0.34
ATP1B3P54709 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
ATP1B3P54709 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
ATP1B3P54709 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ATP1B3P54709 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ATP1B3P54709 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
ATP1B3P54709 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
ATP1B3P54709 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
ATP1B3P54709 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ATP1B3P54709 KRT8P14-201ENST00000414254 1442 ntBASIC12.9□□□□□ -0.34
ATP1B3P54709 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
ATP1B3P54709 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
ATP1B3P54709 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
ATP1B3P54709 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ATP1B3P54709 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
ATP1B3P54709 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.9□□□□□ -0.34
ATP1B3P54709 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ATP1B3P54709 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ATP1B3P54709 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ATP1B3P54709 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms