Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.22■□□□□ 0.03
ITGA8P53708 DOC2GP-202ENST00000514950 1163 ntBASIC15.22■□□□□ 0.03
ITGA8P53708 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.22■□□□□ 0.03
ITGA8P53708 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ITGA8P53708 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ITGA8P53708 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.22■□□□□ 0.03
ITGA8P53708 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.22■□□□□ 0.03
ITGA8P53708 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.22■□□□□ 0.03
ITGA8P53708 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.22■□□□□ 0.03
ITGA8P53708 MIR6074-201ENST00000612054 107 ntBASIC15.22■□□□□ 0.03
ITGA8P53708 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ITGA8P53708 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
ITGA8P53708 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
ITGA8P53708 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
ITGA8P53708 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ITGA8P53708 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ITGA8P53708 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC15.22■□□□□ 0.03
ITGA8P53708 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC15.22■□□□□ 0.03
ITGA8P53708 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ITGA8P53708 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.22■□□□□ 0.03
ITGA8P53708 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ITGA8P53708 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ITGA8P53708 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ITGA8P53708 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
ITGA8P53708 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.22■□□□□ 0.03
ITGA8P53708 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ITGA8P53708 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
ITGA8P53708 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
ITGA8P53708 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.21■□□□□ 0.03
ITGA8P53708 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
ITGA8P53708 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.21■□□□□ 0.03
ITGA8P53708 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ITGA8P53708 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.21■□□□□ 0.03
ITGA8P53708 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
ITGA8P53708 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
ITGA8P53708 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ITGA8P53708 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ITGA8P53708 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ITGA8P53708 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
ITGA8P53708 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ITGA8P53708 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
ITGA8P53708 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ITGA8P53708 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ITGA8P53708 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ITGA8P53708 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.21■□□□□ 0.03
ITGA8P53708 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ITGA8P53708 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.21■□□□□ 0.03
ITGA8P53708 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
ITGA8P53708 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ITGA8P53708 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
ITGA8P53708 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ITGA8P53708 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
ITGA8P53708 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.21■□□□□ 0.03
ITGA8P53708 GIMAP3P-201ENST00000495150 836 ntBASIC15.21■□□□□ 0.03
ITGA8P53708 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.21■□□□□ 0.03
ITGA8P53708 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
ITGA8P53708 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.21■□□□□ 0.03
ITGA8P53708 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ITGA8P53708 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.21■□□□□ 0.03
ITGA8P53708 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.21■□□□□ 0.03
ITGA8P53708 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.21■□□□□ 0.03
ITGA8P53708 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.21■□□□□ 0.03
ITGA8P53708 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.21■□□□□ 0.03
ITGA8P53708 AL603764.1-201ENST00000636452 321 ntBASIC15.21■□□□□ 0.03
ITGA8P53708 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ITGA8P53708 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC15.21■□□□□ 0.03
ITGA8P53708 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ITGA8P53708 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
ITGA8P53708 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ITGA8P53708 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ITGA8P53708 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
ITGA8P53708 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.21■□□□□ 0.03
ITGA8P53708 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
ITGA8P53708 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC15.21■□□□□ 0.02
ITGA8P53708 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
ITGA8P53708 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.21■□□□□ 0.02
ITGA8P53708 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.02
ITGA8P53708 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
ITGA8P53708 AC126335.2-201ENST00000623362 4637 ntBASIC15.21■□□□□ 0.02
ITGA8P53708 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
ITGA8P53708 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ITGA8P53708 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.21■□□□□ 0.02
ITGA8P53708 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC15.21■□□□□ 0.02
ITGA8P53708 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
ITGA8P53708 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.2■□□□□ 0.02
ITGA8P53708 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ITGA8P53708 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ITGA8P53708 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
ITGA8P53708 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ITGA8P53708 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ITGA8P53708 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ITGA8P53708 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
ITGA8P53708 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ITGA8P53708 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.2■□□□□ 0.02
ITGA8P53708 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ITGA8P53708 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ITGA8P53708 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ITGA8P53708 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ITGA8P53708 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ITGA8P53708 SPDYE19P-201ENST00000338590 713 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms