Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SLC25A1P53007 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SLC25A1P53007 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SLC25A1P53007 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SLC25A1P53007 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SLC25A1P53007 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.14□□□□□ -0.31
SLC25A1P53007 AC090643.2-201ENST00000623442 2029 ntBASIC13.14□□□□□ -0.31
SLC25A1P53007 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.14□□□□□ -0.31
SLC25A1P53007 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SLC25A1P53007 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SLC25A1P53007 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SLC25A1P53007 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SLC25A1P53007 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.14□□□□□ -0.31
SLC25A1P53007 FAM207CP-201ENST00000443486 507 ntBASIC13.14□□□□□ -0.31
SLC25A1P53007 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SLC25A1P53007 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.14□□□□□ -0.31
SLC25A1P53007 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.14□□□□□ -0.31
SLC25A1P53007 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.14□□□□□ -0.31
SLC25A1P53007 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.14□□□□□ -0.31
SLC25A1P53007 CTBP2P3-201ENST00000585629 1255 ntBASIC13.14□□□□□ -0.31
SLC25A1P53007 WFDC1-204ENST00000613603 549 ntBASIC13.14□□□□□ -0.31
SLC25A1P53007 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SLC25A1P53007 AJ011932.1-201ENST00000621707 465 ntBASIC13.14□□□□□ -0.31
SLC25A1P53007 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SLC25A1P53007 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SLC25A1P53007 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SLC25A1P53007 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SLC25A1P53007 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SLC25A1P53007 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SLC25A1P53007 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.14□□□□□ -0.31
SLC25A1P53007 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SLC25A1P53007 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SLC25A1P53007 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SLC25A1P53007 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.14□□□□□ -0.31
SLC25A1P53007 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.14□□□□□ -0.31
SLC25A1P53007 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SLC25A1P53007 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SLC25A1P53007 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SLC25A1P53007 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SLC25A1P53007 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SLC25A1P53007 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SLC25A1P53007 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SLC25A1P53007 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SLC25A1P53007 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SLC25A1P53007 FKBP4P6-201ENST00000457486 1332 ntBASIC13.13□□□□□ -0.31
SLC25A1P53007 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SLC25A1P53007 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
SLC25A1P53007 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.13□□□□□ -0.31
SLC25A1P53007 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC25A1P53007 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.13□□□□□ -0.31
SLC25A1P53007 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.13□□□□□ -0.31
SLC25A1P53007 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC25A1P53007 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.13□□□□□ -0.31
SLC25A1P53007 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC25A1P53007 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC25A1P53007 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC25A1P53007 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC25A1P53007 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC25A1P53007 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC25A1P53007 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC25A1P53007 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC25A1P53007 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC25A1P53007 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SLC25A1P53007 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
SLC25A1P53007 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.13□□□□□ -0.31
SLC25A1P53007 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC25A1P53007 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
SLC25A1P53007 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SLC25A1P53007 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC25A1P53007 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
SLC25A1P53007 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC25A1P53007 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SLC25A1P53007 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.13□□□□□ -0.31
SLC25A1P53007 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.13□□□□□ -0.31
SLC25A1P53007 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.13□□□□□ -0.31
SLC25A1P53007 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.13□□□□□ -0.31
SLC25A1P53007 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.13□□□□□ -0.31
SLC25A1P53007 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.13□□□□□ -0.31
SLC25A1P53007 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.13□□□□□ -0.31
SLC25A1P53007 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC25A1P53007 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC25A1P53007 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SLC25A1P53007 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC25A1P53007 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC25A1P53007 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.13□□□□□ -0.31
SLC25A1P53007 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
SLC25A1P53007 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC25A1P53007 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC25A1P53007 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.13□□□□□ -0.31
SLC25A1P53007 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
SLC25A1P53007 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
SLC25A1P53007 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SLC25A1P53007 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC25A1P53007 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.13□□□□□ -0.31
SLC25A1P53007 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC25A1P53007 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SLC25A1P53007 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC25A1P53007 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC25A1P53007 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC25A1P53007 AC015818.8-201ENST00000587907 1519 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms