Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB28P51157 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB28P51157 AC140479.7-201ENST00000636301 2332 ntBASIC14.25□□□□□ -0.13
RAB28P51157 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB28P51157 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB28P51157 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB28P51157 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB28P51157 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RAB28P51157 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RAB28P51157 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
RAB28P51157 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB28P51157 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB28P51157 FAM86MP-201ENST00000340703 885 ntBASIC14.25□□□□□ -0.13
RAB28P51157 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB28P51157 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB28P51157 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.25□□□□□ -0.13
RAB28P51157 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
RAB28P51157 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB28P51157 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB28P51157 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.25□□□□□ -0.13
RAB28P51157 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.25□□□□□ -0.13
RAB28P51157 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.25□□□□□ -0.13
RAB28P51157 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB28P51157 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB28P51157 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.25□□□□□ -0.13
RAB28P51157 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.25□□□□□ -0.13
RAB28P51157 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.25□□□□□ -0.13
RAB28P51157 AL023803.2-201ENST00000620080 638 ntBASIC14.25□□□□□ -0.13
RAB28P51157 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB28P51157 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.25□□□□□ -0.13
RAB28P51157 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.25□□□□□ -0.13
RAB28P51157 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB28P51157 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
RAB28P51157 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB28P51157 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RAB28P51157 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RAB28P51157 AC232323.1-201ENST00000540724 2099 ntBASIC14.25□□□□□ -0.13
RAB28P51157 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
RAB28P51157 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.25□□□□□ -0.13
RAB28P51157 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
RAB28P51157 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB28P51157 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB28P51157 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB28P51157 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.25□□□□□ -0.13
RAB28P51157 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
RAB28P51157 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB28P51157 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB28P51157 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB28P51157 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.25□□□□□ -0.13
RAB28P51157 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RAB28P51157 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB28P51157 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB28P51157 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB28P51157 MYADML-201ENST00000474610 2147 ntBASIC14.24□□□□□ -0.13
RAB28P51157 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB28P51157 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB28P51157 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB28P51157 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB28P51157 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB28P51157 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB28P51157 KRT8P29-201ENST00000420409 1371 ntBASIC14.24□□□□□ -0.13
RAB28P51157 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB28P51157 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB28P51157 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB28P51157 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB28P51157 AC244394.1-201ENST00000435000 1665 ntBASIC14.24□□□□□ -0.13
RAB28P51157 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB28P51157 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB28P51157 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RAB28P51157 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB28P51157 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB28P51157 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB28P51157 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
RAB28P51157 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB28P51157 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.24□□□□□ -0.13
RAB28P51157 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.24□□□□□ -0.13
RAB28P51157 AC012441.2-201ENST00000444843 739 ntBASIC14.24□□□□□ -0.13
RAB28P51157 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB28P51157 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.24□□□□□ -0.13
RAB28P51157 TUBB8P8-201ENST00000458717 1058 ntBASIC14.24□□□□□ -0.13
RAB28P51157 AC021723.1-201ENST00000486306 515 ntBASIC14.24□□□□□ -0.13
RAB28P51157 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.24□□□□□ -0.13
RAB28P51157 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.24□□□□□ -0.13
RAB28P51157 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
RAB28P51157 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.24□□□□□ -0.13
RAB28P51157 AC005730.2-201ENST00000564549 1184 ntBASIC14.24□□□□□ -0.13
RAB28P51157 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB28P51157 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.24□□□□□ -0.13
RAB28P51157 MIR6720-201ENST00000611664 98 ntBASIC14.24□□□□□ -0.13
RAB28P51157 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB28P51157 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB28P51157 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB28P51157 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB28P51157 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB28P51157 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB28P51157 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB28P51157 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
RAB28P51157 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB28P51157 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB28P51157 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 182.5 ms