Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDK7P50613 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CDK7P50613 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDK7P50613 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDK7P50613 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CDK7P50613 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CDK7P50613 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CDK7P50613 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDK7P50613 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CDK7P50613 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.24■□□□□ 0.19
CDK7P50613 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.24■□□□□ 0.19
CDK7P50613 AC007292.2-201ENST00000593524 1812 ntBASIC16.24■□□□□ 0.19
CDK7P50613 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDK7P50613 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CDK7P50613 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDK7P50613 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDK7P50613 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDK7P50613 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CDK7P50613 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDK7P50613 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CDK7P50613 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDK7P50613 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CDK7P50613 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDK7P50613 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDK7P50613 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CDK7P50613 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDK7P50613 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC16.24■□□□□ 0.19
CDK7P50613 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDK7P50613 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CDK7P50613 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.24■□□□□ 0.19
CDK7P50613 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CDK7P50613 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC16.24■□□□□ 0.19
CDK7P50613 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDK7P50613 NFIC-211ENST00000641145 8399 ntBASIC16.24■□□□□ 0.19
CDK7P50613 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.24■□□□□ 0.19
CDK7P50613 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDK7P50613 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.24■□□□□ 0.19
CDK7P50613 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CDK7P50613 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDK7P50613 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CDK7P50613 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
CDK7P50613 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDK7P50613 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.24■□□□□ 0.19
CDK7P50613 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.24■□□□□ 0.19
CDK7P50613 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDK7P50613 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDK7P50613 AP000845.1-201ENST00000581677 2131 ntBASIC16.24■□□□□ 0.19
CDK7P50613 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.24■□□□□ 0.19
CDK7P50613 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDK7P50613 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CDK7P50613 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.23■□□□□ 0.19
CDK7P50613 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDK7P50613 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.23■□□□□ 0.19
CDK7P50613 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.23■□□□□ 0.19
CDK7P50613 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDK7P50613 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDK7P50613 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC16.23■□□□□ 0.19
CDK7P50613 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CDK7P50613 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDK7P50613 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDK7P50613 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDK7P50613 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CDK7P50613 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.23■□□□□ 0.19
CDK7P50613 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDK7P50613 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDK7P50613 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CDK7P50613 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDK7P50613 MIR1227-201ENST00000408484 88 ntBASIC16.23■□□□□ 0.19
CDK7P50613 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC16.23■□□□□ 0.19
CDK7P50613 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
CDK7P50613 HIST2H2BA-201ENST00000412169 381 ntBASIC16.23■□□□□ 0.19
CDK7P50613 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC16.23■□□□□ 0.19
CDK7P50613 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDK7P50613 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC16.23■□□□□ 0.19
CDK7P50613 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC16.23■□□□□ 0.19
CDK7P50613 ORAOV1P1-201ENST00000503108 395 ntBASIC16.23■□□□□ 0.19
CDK7P50613 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC16.23■□□□□ 0.19
CDK7P50613 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC16.23■□□□□ 0.19
CDK7P50613 AC003686.1-201ENST00000550956 1034 ntBASIC16.23■□□□□ 0.19
CDK7P50613 AC027237.1-201ENST00000560942 655 ntBASIC16.23■□□□□ 0.19
CDK7P50613 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC16.23■□□□□ 0.19
CDK7P50613 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDK7P50613 AC007326.1-201ENST00000604539 458 ntBASIC16.23■□□□□ 0.19
CDK7P50613 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CDK7P50613 AC005618.3-201ENST00000624928 458 ntBASIC16.23■□□□□ 0.19
CDK7P50613 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDK7P50613 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDK7P50613 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDK7P50613 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.23■□□□□ 0.19
CDK7P50613 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDK7P50613 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDK7P50613 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.23■□□□□ 0.19
CDK7P50613 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDK7P50613 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDK7P50613 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
CDK7P50613 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDK7P50613 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDK7P50613 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDK7P50613 AHCYP4-201ENST00000419201 1315 ntBASIC16.22■□□□□ 0.19
CDK7P50613 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms