Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC126365.1-201ENST00000578585 1514 ntBASIC14.51□□□□□ -0.09
CXCL12P48061 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CXCL12P48061 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CXCL12P48061 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC14.5□□□□□ -0.09
CXCL12P48061 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.5□□□□□ -0.09
CXCL12P48061 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.5□□□□□ -0.09
CXCL12P48061 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
CXCL12P48061 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.5□□□□□ -0.09
CXCL12P48061 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CXCL12P48061 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CXCL12P48061 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CXCL12P48061 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CXCL12P48061 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.5□□□□□ -0.09
CXCL12P48061 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CXCL12P48061 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.5□□□□□ -0.09
CXCL12P48061 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CXCL12P48061 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CXCL12P48061 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CXCL12P48061 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CXCL12P48061 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CXCL12P48061 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CXCL12P48061 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC14.5□□□□□ -0.09
CXCL12P48061 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC14.5□□□□□ -0.09
CXCL12P48061 AL135901.1-201ENST00000451812 333 ntBASIC14.5□□□□□ -0.09
CXCL12P48061 RNA5SP406-201ENST00000516106 112 ntBASIC14.5□□□□□ -0.09
CXCL12P48061 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC14.5□□□□□ -0.09
CXCL12P48061 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC14.5□□□□□ -0.09
CXCL12P48061 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
CXCL12P48061 AC140658.4-201ENST00000561990 352 ntBASIC14.5□□□□□ -0.09
CXCL12P48061 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC14.5□□□□□ -0.09
CXCL12P48061 NAMA-206ENST00000605377 509 ntTSL 5 BASIC14.5□□□□□ -0.09
CXCL12P48061 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CXCL12P48061 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CXCL12P48061 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.5□□□□□ -0.09
CXCL12P48061 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.5□□□□□ -0.09
CXCL12P48061 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.5□□□□□ -0.09
CXCL12P48061 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.5□□□□□ -0.09
CXCL12P48061 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.5□□□□□ -0.09
CXCL12P48061 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CXCL12P48061 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.5□□□□□ -0.09
CXCL12P48061 AC067930.6-201ENST00000623257 4947 ntBASIC14.49□□□□□ -0.09
CXCL12P48061 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.49□□□□□ -0.09
CXCL12P48061 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CXCL12P48061 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CXCL12P48061 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CXCL12P48061 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CXCL12P48061 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CXCL12P48061 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.49□□□□□ -0.09
CXCL12P48061 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CXCL12P48061 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.49□□□□□ -0.09
CXCL12P48061 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CXCL12P48061 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CXCL12P48061 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.49□□□□□ -0.09
CXCL12P48061 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CXCL12P48061 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CXCL12P48061 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.49□□□□□ -0.09
CXCL12P48061 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CXCL12P48061 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CXCL12P48061 PYY2-201ENST00000315776 282 ntBASIC14.49□□□□□ -0.09
CXCL12P48061 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CXCL12P48061 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CXCL12P48061 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CXCL12P48061 CELP-201ENST00000411440 1249 ntTSL 5 BASIC14.49□□□□□ -0.09
CXCL12P48061 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CXCL12P48061 OR8T1P-201ENST00000421347 918 ntBASIC14.49□□□□□ -0.09
CXCL12P48061 RGS5-216ENST00000449680 788 ntTSL 3 BASIC14.49□□□□□ -0.09
CXCL12P48061 GNG10P1-201ENST00000452289 199 ntBASIC14.49□□□□□ -0.09
CXCL12P48061 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CXCL12P48061 PGAM1P12-201ENST00000505622 748 ntBASIC14.49□□□□□ -0.09
CXCL12P48061 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC14.49□□□□□ -0.09
CXCL12P48061 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC14.49□□□□□ -0.09
CXCL12P48061 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CXCL12P48061 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC14.49□□□□□ -0.09
CXCL12P48061 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.49□□□□□ -0.09
CXCL12P48061 PEBP1P2-201ENST00000603980 558 ntBASIC14.49□□□□□ -0.09
CXCL12P48061 MIR6746-201ENST00000620971 63 ntBASIC14.49□□□□□ -0.09
CXCL12P48061 LINC00244-201ENST00000625073 613 ntBASIC14.49□□□□□ -0.09
CXCL12P48061 ST5-261ENST00000626808 1071 ntTSL 5 BASIC14.49□□□□□ -0.09
CXCL12P48061 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CXCL12P48061 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CXCL12P48061 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
CXCL12P48061 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CXCL12P48061 C18orf15-201ENST00000623680 2534 ntBASIC14.49□□□□□ -0.09
CXCL12P48061 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CXCL12P48061 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CXCL12P48061 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CXCL12P48061 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CXCL12P48061 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CXCL12P48061 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CXCL12P48061 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CXCL12P48061 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CXCL12P48061 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CXCL12P48061 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CXCL12P48061 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.48□□□□□ -0.09
CXCL12P48061 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CXCL12P48061 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
CXCL12P48061 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CXCL12P48061 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CXCL12P48061 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CXCL12P48061 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms