Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
USP8P40818 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
USP8P40818 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
USP8P40818 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
USP8P40818 DGCR5-201ENST00000399539 862 ntBASIC16.23■□□□□ 0.19
USP8P40818 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
USP8P40818 HMGN1P19-201ENST00000436976 333 ntBASIC16.23■□□□□ 0.19
USP8P40818 AC114812.1-204ENST00000449669 728 ntBASIC16.23■□□□□ 0.19
USP8P40818 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.23■□□□□ 0.19
USP8P40818 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
USP8P40818 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.23■□□□□ 0.19
USP8P40818 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.23■□□□□ 0.19
USP8P40818 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.23■□□□□ 0.19
USP8P40818 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.23■□□□□ 0.19
USP8P40818 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.23■□□□□ 0.19
USP8P40818 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.23■□□□□ 0.19
USP8P40818 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
USP8P40818 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
USP8P40818 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
USP8P40818 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
USP8P40818 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
USP8P40818 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
USP8P40818 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
USP8P40818 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
USP8P40818 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
USP8P40818 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
USP8P40818 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC16.23■□□□□ 0.19
USP8P40818 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
USP8P40818 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
USP8P40818 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.23■□□□□ 0.19
USP8P40818 AC055811.4-201ENST00000624039 1754 ntBASIC16.23■□□□□ 0.19
USP8P40818 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
USP8P40818 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
USP8P40818 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC16.23■□□□□ 0.19
USP8P40818 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
USP8P40818 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
USP8P40818 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
USP8P40818 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.22■□□□□ 0.19
USP8P40818 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP8P40818 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
USP8P40818 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.22■□□□□ 0.19
USP8P40818 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP8P40818 KRT8P14-201ENST00000414254 1442 ntBASIC16.22■□□□□ 0.19
USP8P40818 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.22■□□□□ 0.19
USP8P40818 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
USP8P40818 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP8P40818 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
USP8P40818 AL162726.2-201ENST00000438986 1017 ntBASIC16.22■□□□□ 0.19
USP8P40818 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.22■□□□□ 0.19
USP8P40818 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP8P40818 AC022616.1-201ENST00000518688 554 ntBASIC16.22■□□□□ 0.19
USP8P40818 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.22■□□□□ 0.19
USP8P40818 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.22■□□□□ 0.19
USP8P40818 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.22■□□□□ 0.19
USP8P40818 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.22■□□□□ 0.19
USP8P40818 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.22■□□□□ 0.19
USP8P40818 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.22■□□□□ 0.19
USP8P40818 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP8P40818 AC092364.2-202ENST00000597012 1073 ntBASIC16.22■□□□□ 0.19
USP8P40818 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
USP8P40818 AL033527.5-201ENST00000641382 801 ntBASIC16.22■□□□□ 0.19
USP8P40818 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP8P40818 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP8P40818 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
USP8P40818 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.22■□□□□ 0.19
USP8P40818 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP8P40818 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC16.22■□□□□ 0.19
USP8P40818 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP8P40818 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.22■□□□□ 0.19
USP8P40818 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
USP8P40818 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
USP8P40818 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
USP8P40818 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.22■□□□□ 0.19
USP8P40818 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
USP8P40818 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
USP8P40818 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.22■□□□□ 0.19
USP8P40818 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
USP8P40818 CICP8-201ENST00000455800 2813 ntBASIC16.22■□□□□ 0.19
USP8P40818 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
USP8P40818 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
USP8P40818 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.22■□□□□ 0.19
USP8P40818 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
USP8P40818 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
USP8P40818 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.21■□□□□ 0.19
USP8P40818 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
USP8P40818 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.21■□□□□ 0.19
USP8P40818 AC097359.2-201ENST00000604992 2389 ntBASIC16.21■□□□□ 0.19
USP8P40818 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
USP8P40818 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
USP8P40818 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
USP8P40818 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
USP8P40818 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
USP8P40818 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
USP8P40818 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
USP8P40818 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
USP8P40818 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
USP8P40818 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.21■□□□□ 0.19
USP8P40818 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
USP8P40818 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
USP8P40818 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms