Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LSP1P33241 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC14.89□□□□□ -0.03
LSP1P33241 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LSP1P33241 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LSP1P33241 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC14.89□□□□□ -0.03
LSP1P33241 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LSP1P33241 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LSP1P33241 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.89□□□□□ -0.03
LSP1P33241 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LSP1P33241 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
LSP1P33241 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LSP1P33241 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LSP1P33241 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.89□□□□□ -0.03
LSP1P33241 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LSP1P33241 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
LSP1P33241 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
LSP1P33241 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.89□□□□□ -0.03
LSP1P33241 AL135744.1-201ENST00000565098 629 ntBASIC14.89□□□□□ -0.03
LSP1P33241 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
LSP1P33241 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.89□□□□□ -0.03
LSP1P33241 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.89□□□□□ -0.03
LSP1P33241 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.89□□□□□ -0.03
LSP1P33241 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.89□□□□□ -0.03
LSP1P33241 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LSP1P33241 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
LSP1P33241 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LSP1P33241 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.89□□□□□ -0.03
LSP1P33241 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LSP1P33241 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LSP1P33241 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LSP1P33241 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LSP1P33241 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LSP1P33241 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC14.89□□□□□ -0.03
LSP1P33241 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.89□□□□□ -0.03
LSP1P33241 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.89□□□□□ -0.03
LSP1P33241 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC14.89□□□□□ -0.03
LSP1P33241 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LSP1P33241 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LSP1P33241 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC14.89□□□□□ -0.03
LSP1P33241 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LSP1P33241 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LSP1P33241 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LSP1P33241 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LSP1P33241 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LSP1P33241 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LSP1P33241 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LSP1P33241 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LSP1P33241 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
LSP1P33241 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.88□□□□□ -0.03
LSP1P33241 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LSP1P33241 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LSP1P33241 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LSP1P33241 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LSP1P33241 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
LSP1P33241 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LSP1P33241 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LSP1P33241 SPDYE17-201ENST00000412399 783 ntBASIC14.88□□□□□ -0.03
LSP1P33241 AL590627.1-203ENST00000421194 1026 ntBASIC14.88□□□□□ -0.03
LSP1P33241 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
LSP1P33241 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LSP1P33241 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LSP1P33241 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
LSP1P33241 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.88□□□□□ -0.03
LSP1P33241 MIR7706-201ENST00000613747 67 ntBASIC14.88□□□□□ -0.03
LSP1P33241 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.88□□□□□ -0.03
LSP1P33241 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.88□□□□□ -0.03
LSP1P33241 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.88□□□□□ -0.03
LSP1P33241 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.88□□□□□ -0.03
LSP1P33241 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.88□□□□□ -0.03
LSP1P33241 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LSP1P33241 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
LSP1P33241 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LSP1P33241 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
LSP1P33241 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LSP1P33241 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.88□□□□□ -0.03
LSP1P33241 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC14.88□□□□□ -0.03
LSP1P33241 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LSP1P33241 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LSP1P33241 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
LSP1P33241 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LSP1P33241 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LSP1P33241 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LSP1P33241 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LSP1P33241 PCDHA6-201ENST00000378126 3267 ntBASIC14.88□□□□□ -0.03
LSP1P33241 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LSP1P33241 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LSP1P33241 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LSP1P33241 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LSP1P33241 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LSP1P33241 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LSP1P33241 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LSP1P33241 F2-205ENST00000530231 1849 ntTSL 5 BASIC14.87□□□□□ -0.03
LSP1P33241 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LSP1P33241 AL121723.1-201ENST00000445194 1519 ntBASIC14.87□□□□□ -0.03
LSP1P33241 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LSP1P33241 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LSP1P33241 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LSP1P33241 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LSP1P33241 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LSP1P33241 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms