Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.64□□□□□ -0.23
ABCD3P28288 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.64□□□□□ -0.23
ABCD3P28288 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.64□□□□□ -0.23
ABCD3P28288 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.64□□□□□ -0.23
ABCD3P28288 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
ABCD3P28288 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ABCD3P28288 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ABCD3P28288 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ABCD3P28288 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ABCD3P28288 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ABCD3P28288 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ABCD3P28288 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ABCD3P28288 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
ABCD3P28288 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ABCD3P28288 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ABCD3P28288 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.63□□□□□ -0.23
ABCD3P28288 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ABCD3P28288 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ABCD3P28288 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ABCD3P28288 MIR326-201ENST00000362220 95 ntBASIC13.63□□□□□ -0.23
ABCD3P28288 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.63□□□□□ -0.23
ABCD3P28288 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
ABCD3P28288 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.63□□□□□ -0.23
ABCD3P28288 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.63□□□□□ -0.23
ABCD3P28288 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.63□□□□□ -0.23
ABCD3P28288 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ABCD3P28288 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.63□□□□□ -0.23
ABCD3P28288 RPSAP36-202ENST00000494591 1261 ntBASIC13.63□□□□□ -0.23
ABCD3P28288 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ABCD3P28288 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ABCD3P28288 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.63□□□□□ -0.23
ABCD3P28288 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.63□□□□□ -0.23
ABCD3P28288 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
ABCD3P28288 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
ABCD3P28288 GRK6P1-201ENST00000400595 1711 ntBASIC13.63□□□□□ -0.23
ABCD3P28288 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ABCD3P28288 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ABCD3P28288 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ABCD3P28288 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ABCD3P28288 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
ABCD3P28288 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
ABCD3P28288 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ABCD3P28288 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ABCD3P28288 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ABCD3P28288 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.63□□□□□ -0.23
ABCD3P28288 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.63□□□□□ -0.23
ABCD3P28288 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ABCD3P28288 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ABCD3P28288 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ABCD3P28288 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.62□□□□□ -0.23
ABCD3P28288 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ABCD3P28288 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
ABCD3P28288 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.62□□□□□ -0.23
ABCD3P28288 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ABCD3P28288 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ABCD3P28288 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
ABCD3P28288 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ABCD3P28288 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.62□□□□□ -0.23
ABCD3P28288 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.62□□□□□ -0.23
ABCD3P28288 AC140479.7-201ENST00000636301 2332 ntBASIC13.62□□□□□ -0.23
ABCD3P28288 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ABCD3P28288 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ABCD3P28288 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ABCD3P28288 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ABCD3P28288 AC139712.1-201ENST00000378256 1875 ntBASIC13.62□□□□□ -0.23
ABCD3P28288 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ABCD3P28288 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ABCD3P28288 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
ABCD3P28288 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ABCD3P28288 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ABCD3P28288 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ABCD3P28288 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.62□□□□□ -0.23
ABCD3P28288 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ABCD3P28288 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
ABCD3P28288 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.62□□□□□ -0.23
ABCD3P28288 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.62□□□□□ -0.23
ABCD3P28288 BTBD6P1-201ENST00000412176 1267 ntBASIC13.62□□□□□ -0.23
ABCD3P28288 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.62□□□□□ -0.23
ABCD3P28288 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ABCD3P28288 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.62□□□□□ -0.23
ABCD3P28288 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ABCD3P28288 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
ABCD3P28288 GOLGA2P4-201ENST00000441462 777 ntBASIC13.62□□□□□ -0.23
ABCD3P28288 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.62□□□□□ -0.23
ABCD3P28288 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.62□□□□□ -0.23
ABCD3P28288 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ABCD3P28288 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
ABCD3P28288 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.62□□□□□ -0.23
ABCD3P28288 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.62□□□□□ -0.23
ABCD3P28288 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.62□□□□□ -0.23
ABCD3P28288 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.62□□□□□ -0.23
ABCD3P28288 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ABCD3P28288 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ABCD3P28288 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ABCD3P28288 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ABCD3P28288 AC139749.1-202ENST00000617529 3139 ntBASIC13.62□□□□□ -0.23
ABCD3P28288 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
ABCD3P28288 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ABCD3P28288 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ABCD3P28288 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms