Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
MMP11P24347 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.06□□□□□ -0.16
MMP11P24347 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP11P24347 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP11P24347 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MMP11P24347 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
MMP11P24347 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
MMP11P24347 HIST2H2BB-201ENST00000449108 381 ntBASIC14.06□□□□□ -0.16
MMP11P24347 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.06□□□□□ -0.16
MMP11P24347 AC091804.1-201ENST00000486888 567 ntBASIC14.06□□□□□ -0.16
MMP11P24347 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.06□□□□□ -0.16
MMP11P24347 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.06□□□□□ -0.16
MMP11P24347 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.06□□□□□ -0.16
MMP11P24347 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.06□□□□□ -0.16
MMP11P24347 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.06□□□□□ -0.16
MMP11P24347 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.06□□□□□ -0.16
MMP11P24347 AL139099.5-201ENST00000635274 300 ntBASIC14.06□□□□□ -0.16
MMP11P24347 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MMP11P24347 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
MMP11P24347 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.06□□□□□ -0.16
MMP11P24347 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.06□□□□□ -0.16
MMP11P24347 AC018442.1-201ENST00000421439 2061 ntBASIC14.06□□□□□ -0.16
MMP11P24347 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP11P24347 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MMP11P24347 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP11P24347 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP11P24347 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP11P24347 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.06□□□□□ -0.16
MMP11P24347 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP11P24347 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.06□□□□□ -0.16
MMP11P24347 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.06□□□□□ -0.16
MMP11P24347 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MMP11P24347 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP11P24347 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MMP11P24347 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP11P24347 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.06□□□□□ -0.16
MMP11P24347 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
MMP11P24347 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP11P24347 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP11P24347 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP11P24347 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP11P24347 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP11P24347 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP11P24347 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP11P24347 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP11P24347 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP11P24347 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.05□□□□□ -0.16
MMP11P24347 LINC01230-201ENST00000625222 3017 ntBASIC14.05□□□□□ -0.16
MMP11P24347 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP11P24347 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP11P24347 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP11P24347 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP11P24347 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.05□□□□□ -0.16
MMP11P24347 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.05□□□□□ -0.16
MMP11P24347 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
MMP11P24347 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.05□□□□□ -0.16
MMP11P24347 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
MMP11P24347 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP11P24347 AC004945.1-201ENST00000416738 983 ntBASIC14.05□□□□□ -0.16
MMP11P24347 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.05□□□□□ -0.16
MMP11P24347 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.05□□□□□ -0.16
MMP11P24347 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.05□□□□□ -0.16
MMP11P24347 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.05□□□□□ -0.16
MMP11P24347 AC126915.1-201ENST00000522847 1038 ntBASIC14.05□□□□□ -0.16
MMP11P24347 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.05□□□□□ -0.16
MMP11P24347 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.05□□□□□ -0.16
MMP11P24347 AP001002.3-201ENST00000623482 206 ntBASIC14.05□□□□□ -0.16
MMP11P24347 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
MMP11P24347 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP11P24347 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP11P24347 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP11P24347 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.05□□□□□ -0.16
MMP11P24347 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
MMP11P24347 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP11P24347 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP11P24347 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.05□□□□□ -0.16
MMP11P24347 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.05□□□□□ -0.16
MMP11P24347 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
MMP11P24347 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.05□□□□□ -0.16
MMP11P24347 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP11P24347 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP11P24347 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.05□□□□□ -0.16
MMP11P24347 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MMP11P24347 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
MMP11P24347 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
MMP11P24347 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
MMP11P24347 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.04□□□□□ -0.16
MMP11P24347 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.04□□□□□ -0.16
MMP11P24347 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MMP11P24347 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.04□□□□□ -0.16
MMP11P24347 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.04□□□□□ -0.16
MMP11P24347 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
MMP11P24347 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
MMP11P24347 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
MMP11P24347 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
MMP11P24347 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
MMP11P24347 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.04□□□□□ -0.16
MMP11P24347 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
MMP11P24347 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MMP11P24347 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms