Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFX1P22670 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RFX1P22670 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFX1P22670 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFX1P22670 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFX1P22670 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFX1P22670 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFX1P22670 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.13■□□□□ 0.17
RFX1P22670 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.13■□□□□ 0.17
RFX1P22670 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFX1P22670 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RFX1P22670 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.13■□□□□ 0.17
RFX1P22670 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFX1P22670 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RFX1P22670 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFX1P22670 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
RFX1P22670 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RFX1P22670 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RFX1P22670 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.13■□□□□ 0.17
RFX1P22670 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFX1P22670 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.13■□□□□ 0.17
RFX1P22670 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RFX1P22670 ZNF767P-206ENST00000513792 565 ntBASIC16.13■□□□□ 0.17
RFX1P22670 LINC01922-201ENST00000562582 719 ntBASIC16.13■□□□□ 0.17
RFX1P22670 AC020914.3-201ENST00000594712 304 ntBASIC16.13■□□□□ 0.17
RFX1P22670 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.13■□□□□ 0.17
RFX1P22670 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
RFX1P22670 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.13■□□□□ 0.17
RFX1P22670 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.13■□□□□ 0.17
RFX1P22670 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.13■□□□□ 0.17
RFX1P22670 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFX1P22670 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RFX1P22670 HSPA7-201ENST00000445535 1927 ntBASIC16.13■□□□□ 0.17
RFX1P22670 ABR-205ENST00000544583 5595 ntTSL 2 BASIC16.13■□□□□ 0.17
RFX1P22670 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.13■□□□□ 0.17
RFX1P22670 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFX1P22670 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RFX1P22670 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFX1P22670 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
RFX1P22670 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RFX1P22670 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFX1P22670 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC16.12■□□□□ 0.17
RFX1P22670 AL161772.1-201ENST00000610494 4412 ntBASIC16.12■□□□□ 0.17
RFX1P22670 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFX1P22670 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
RFX1P22670 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
RFX1P22670 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFX1P22670 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFX1P22670 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFX1P22670 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
RFX1P22670 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.12■□□□□ 0.17
RFX1P22670 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RFX1P22670 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.12■□□□□ 0.17
RFX1P22670 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
RFX1P22670 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFX1P22670 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFX1P22670 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
RFX1P22670 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFX1P22670 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RFX1P22670 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.12■□□□□ 0.17
RFX1P22670 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.12■□□□□ 0.17
RFX1P22670 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.12■□□□□ 0.17
RFX1P22670 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.12■□□□□ 0.17
RFX1P22670 AC131206.1-201ENST00000538078 1211 ntBASIC16.12■□□□□ 0.17
RFX1P22670 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.12■□□□□ 0.17
RFX1P22670 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.12■□□□□ 0.17
RFX1P22670 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.12■□□□□ 0.17
RFX1P22670 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFX1P22670 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.12■□□□□ 0.17
RFX1P22670 AC138951.2-201ENST00000623455 1161 ntBASIC16.12■□□□□ 0.17
RFX1P22670 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RFX1P22670 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RFX1P22670 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFX1P22670 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFX1P22670 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.12■□□□□ 0.17
RFX1P22670 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFX1P22670 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.12■□□□□ 0.17
RFX1P22670 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.12■□□□□ 0.17
RFX1P22670 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFX1P22670 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFX1P22670 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC16.12■□□□□ 0.17
RFX1P22670 AC092135.3-201ENST00000624151 1846 ntBASIC16.12■□□□□ 0.17
RFX1P22670 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.12■□□□□ 0.17
RFX1P22670 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RFX1P22670 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RFX1P22670 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RFX1P22670 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFX1P22670 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.12■□□□□ 0.17
RFX1P22670 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFX1P22670 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RFX1P22670 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFX1P22670 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RFX1P22670 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RFX1P22670 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
RFX1P22670 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFX1P22670 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFX1P22670 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RFX1P22670 MSTO2P-201ENST00000314835 1709 ntBASIC16.11■□□□□ 0.17
RFX1P22670 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RFX1P22670 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms