Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
MSR1P21757 FKBP4P6-201ENST00000457486 1332 ntBASIC13.12□□□□□ -0.31
MSR1P21757 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MSR1P21757 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MSR1P21757 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MSR1P21757 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
MSR1P21757 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MSR1P21757 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
MSR1P21757 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MSR1P21757 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MSR1P21757 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MSR1P21757 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.11□□□□□ -0.31
MSR1P21757 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.11□□□□□ -0.31
MSR1P21757 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
MSR1P21757 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.11□□□□□ -0.31
MSR1P21757 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
MSR1P21757 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.11□□□□□ -0.31
MSR1P21757 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.11□□□□□ -0.31
MSR1P21757 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MSR1P21757 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MSR1P21757 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MSR1P21757 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.11□□□□□ -0.31
MSR1P21757 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MSR1P21757 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
MSR1P21757 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MSR1P21757 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MSR1P21757 RN7SKP230-201ENST00000365642 335 ntBASIC13.11□□□□□ -0.31
MSR1P21757 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
MSR1P21757 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MSR1P21757 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
MSR1P21757 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.11□□□□□ -0.31
MSR1P21757 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.11□□□□□ -0.31
MSR1P21757 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MSR1P21757 GCOM2-201ENST00000509133 1104 ntBASIC13.11□□□□□ -0.31
MSR1P21757 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.11□□□□□ -0.31
MSR1P21757 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.11□□□□□ -0.31
MSR1P21757 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
MSR1P21757 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.11□□□□□ -0.31
MSR1P21757 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
MSR1P21757 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
MSR1P21757 AC008735.3-201ENST00000596646 500 ntBASIC13.11□□□□□ -0.31
MSR1P21757 AC233724.13-201ENST00000598383 410 ntBASIC13.11□□□□□ -0.31
MSR1P21757 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.11□□□□□ -0.31
MSR1P21757 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.11□□□□□ -0.31
MSR1P21757 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MSR1P21757 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MSR1P21757 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MSR1P21757 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MSR1P21757 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
MSR1P21757 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MSR1P21757 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MSR1P21757 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.11□□□□□ -0.31
MSR1P21757 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
MSR1P21757 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.11□□□□□ -0.31
MSR1P21757 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MSR1P21757 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.11□□□□□ -0.31
MSR1P21757 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
MSR1P21757 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
MSR1P21757 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
MSR1P21757 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MSR1P21757 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MSR1P21757 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
MSR1P21757 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
MSR1P21757 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
MSR1P21757 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
MSR1P21757 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.1□□□□□ -0.31
MSR1P21757 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.1□□□□□ -0.31
MSR1P21757 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
MSR1P21757 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
MSR1P21757 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MSR1P21757 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
MSR1P21757 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
MSR1P21757 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MSR1P21757 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
MSR1P21757 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
MSR1P21757 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
MSR1P21757 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MSR1P21757 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MSR1P21757 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MSR1P21757 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MSR1P21757 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.1□□□□□ -0.31
MSR1P21757 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MSR1P21757 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.1□□□□□ -0.31
MSR1P21757 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.1□□□□□ -0.31
MSR1P21757 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MSR1P21757 BCRP2-202ENST00000447763 634 ntBASIC13.1□□□□□ -0.31
MSR1P21757 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.1□□□□□ -0.31
MSR1P21757 USP32P1-208ENST00000506594 1164 ntBASIC13.1□□□□□ -0.31
MSR1P21757 BCRP6-201ENST00000510112 632 ntBASIC13.1□□□□□ -0.31
MSR1P21757 BCRP7-201ENST00000511549 544 ntBASIC13.1□□□□□ -0.31
MSR1P21757 AP005018.1-201ENST00000525475 301 ntBASIC13.1□□□□□ -0.31
MSR1P21757 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.1□□□□□ -0.31
MSR1P21757 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MSR1P21757 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.1□□□□□ -0.31
MSR1P21757 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.1□□□□□ -0.31
MSR1P21757 GNRHR2-203ENST00000581100 1187 ntBASIC13.1□□□□□ -0.31
MSR1P21757 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
MSR1P21757 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.1□□□□□ -0.31
MSR1P21757 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MSR1P21757 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms