Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.04□□□□□ -0.32
ATF1P18846 AC004840.1-201ENST00000636359 365 ntBASIC13.04□□□□□ -0.32
ATF1P18846 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
ATF1P18846 AC020658.7-201ENST00000624274 2442 ntBASIC13.04□□□□□ -0.32
ATF1P18846 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
ATF1P18846 AC111170.3-201ENST00000624282 2464 ntBASIC13.04□□□□□ -0.32
ATF1P18846 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
ATF1P18846 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ATF1P18846 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.04□□□□□ -0.32
ATF1P18846 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ATF1P18846 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATF1P18846 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
ATF1P18846 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.04□□□□□ -0.32
ATF1P18846 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATF1P18846 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
ATF1P18846 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATF1P18846 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATF1P18846 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATF1P18846 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
ATF1P18846 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATF1P18846 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
ATF1P18846 AL591122.2-201ENST00000624125 1853 ntBASIC13.04□□□□□ -0.32
ATF1P18846 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ATF1P18846 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
ATF1P18846 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATF1P18846 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATF1P18846 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATF1P18846 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATF1P18846 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATF1P18846 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ATF1P18846 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
ATF1P18846 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
ATF1P18846 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
ATF1P18846 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATF1P18846 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATF1P18846 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ATF1P18846 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ATF1P18846 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.03□□□□□ -0.32
ATF1P18846 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
ATF1P18846 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
ATF1P18846 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATF1P18846 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ATF1P18846 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATF1P18846 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATF1P18846 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ATF1P18846 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.03□□□□□ -0.32
ATF1P18846 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.03□□□□□ -0.32
ATF1P18846 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.03□□□□□ -0.32
ATF1P18846 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
ATF1P18846 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.03□□□□□ -0.32
ATF1P18846 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.03□□□□□ -0.32
ATF1P18846 AL049840.4-201ENST00000602422 811 ntBASIC13.03□□□□□ -0.32
ATF1P18846 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.03□□□□□ -0.32
ATF1P18846 AL390754.1-201ENST00000619088 582 ntBASIC13.03□□□□□ -0.32
ATF1P18846 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.03□□□□□ -0.32
ATF1P18846 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATF1P18846 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATF1P18846 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
ATF1P18846 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ATF1P18846 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATF1P18846 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATF1P18846 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
ATF1P18846 KRT8P14-201ENST00000414254 1442 ntBASIC13.03□□□□□ -0.32
ATF1P18846 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.03□□□□□ -0.32
ATF1P18846 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.03□□□□□ -0.32
ATF1P18846 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ATF1P18846 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
ATF1P18846 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
ATF1P18846 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.03□□□□□ -0.32
ATF1P18846 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
ATF1P18846 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
ATF1P18846 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATF1P18846 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
ATF1P18846 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATF1P18846 AC022144.1-201ENST00000602255 1580 ntBASIC13.03□□□□□ -0.32
ATF1P18846 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
ATF1P18846 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ATF1P18846 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.02□□□□□ -0.32
ATF1P18846 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ATF1P18846 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ATF1P18846 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
ATF1P18846 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ATF1P18846 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ATF1P18846 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.02□□□□□ -0.32
ATF1P18846 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ATF1P18846 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.02□□□□□ -0.32
ATF1P18846 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.02□□□□□ -0.32
ATF1P18846 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.02□□□□□ -0.32
ATF1P18846 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ATF1P18846 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
ATF1P18846 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.02□□□□□ -0.32
ATF1P18846 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
ATF1P18846 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ATF1P18846 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.02□□□□□ -0.32
ATF1P18846 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ATF1P18846 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.02□□□□□ -0.32
ATF1P18846 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
ATF1P18846 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.02□□□□□ -0.33
ATF1P18846 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
ATF1P18846 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms