Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
BRAFP15056 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BRAFP15056 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
BRAFP15056 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BRAFP15056 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BRAFP15056 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
BRAFP15056 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BRAFP15056 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
BRAFP15056 AC105206.1-202ENST00000314927 2368 ntBASIC15.29■□□□□ 0.04
BRAFP15056 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
BRAFP15056 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.29■□□□□ 0.04
BRAFP15056 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BRAFP15056 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
BRAFP15056 AC016397.2-201ENST00000624848 1985 ntBASIC15.29■□□□□ 0.04
BRAFP15056 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
BRAFP15056 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
BRAFP15056 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BRAFP15056 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BRAFP15056 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
BRAFP15056 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
BRAFP15056 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
BRAFP15056 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
BRAFP15056 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BRAFP15056 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
BRAFP15056 AC063926.2-201ENST00000623766 1308 ntBASIC15.29■□□□□ 0.04
BRAFP15056 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BRAFP15056 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BRAFP15056 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
BRAFP15056 AP006294.1-201ENST00000415407 339 ntBASIC15.29■□□□□ 0.04
BRAFP15056 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BRAFP15056 KRT18P43-201ENST00000469825 1281 ntBASIC15.29■□□□□ 0.04
BRAFP15056 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.29■□□□□ 0.04
BRAFP15056 AC104596.2-201ENST00000512793 793 ntBASIC15.29■□□□□ 0.04
BRAFP15056 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.29■□□□□ 0.04
BRAFP15056 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.29■□□□□ 0.04
BRAFP15056 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.29■□□□□ 0.04
BRAFP15056 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.29■□□□□ 0.04
BRAFP15056 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.29■□□□□ 0.04
BRAFP15056 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
BRAFP15056 AC000095.1-201ENST00000603208 874 ntBASIC15.29■□□□□ 0.04
BRAFP15056 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
BRAFP15056 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.29■□□□□ 0.04
BRAFP15056 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
BRAFP15056 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
BRAFP15056 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
BRAFP15056 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BRAFP15056 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BRAFP15056 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.29■□□□□ 0.04
BRAFP15056 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
BRAFP15056 MAPT-IT1-201ENST00000624111 3016 ntBASIC15.29■□□□□ 0.04
BRAFP15056 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
BRAFP15056 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BRAFP15056 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
BRAFP15056 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
BRAFP15056 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.28■□□□□ 0.04
BRAFP15056 AC130686.1-201ENST00000622936 2466 ntBASIC15.28■□□□□ 0.04
BRAFP15056 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BRAFP15056 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
BRAFP15056 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.28■□□□□ 0.04
BRAFP15056 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
BRAFP15056 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BRAFP15056 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BRAFP15056 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
BRAFP15056 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BRAFP15056 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
BRAFP15056 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BRAFP15056 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
BRAFP15056 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
BRAFP15056 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.28■□□□□ 0.04
BRAFP15056 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BRAFP15056 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
BRAFP15056 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BRAFP15056 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
BRAFP15056 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
BRAFP15056 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
BRAFP15056 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BRAFP15056 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.28■□□□□ 0.04
BRAFP15056 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
BRAFP15056 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.28■□□□□ 0.04
BRAFP15056 INE1-201ENST00000456273 945 ntBASIC15.28■□□□□ 0.04
BRAFP15056 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.28■□□□□ 0.04
BRAFP15056 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.28■□□□□ 0.04
BRAFP15056 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.28■□□□□ 0.04
BRAFP15056 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.28■□□□□ 0.04
BRAFP15056 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
BRAFP15056 BRI3BPP1-201ENST00000594224 787 ntBASIC15.28■□□□□ 0.04
BRAFP15056 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
BRAFP15056 AC239800.4-201ENST00000603712 296 ntBASIC15.28■□□□□ 0.04
BRAFP15056 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.28■□□□□ 0.04
BRAFP15056 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
BRAFP15056 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
BRAFP15056 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
BRAFP15056 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.28■□□□□ 0.04
BRAFP15056 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BRAFP15056 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
BRAFP15056 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
BRAFP15056 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
BRAFP15056 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BRAFP15056 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.28■□□□□ 0.04
BRAFP15056 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms