Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHGAP10645 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHGAP10645 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CHGAP10645 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CHGAP10645 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHGAP10645 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHGAP10645 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CHGAP10645 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHGAP10645 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHGAP10645 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHGAP10645 AC092135.3-201ENST00000624151 1846 ntBASIC21.07■□□□□ 0.96
CHGAP10645 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CHGAP10645 KRT17P5-201ENST00000332088 839 ntBASIC21.07■□□□□ 0.96
CHGAP10645 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHGAP10645 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHGAP10645 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHGAP10645 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC21.07■□□□□ 0.96
CHGAP10645 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CHGAP10645 MT3-203ENST00000565838 421 ntTSL 3 BASIC21.07■□□□□ 0.96
CHGAP10645 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC21.07■□□□□ 0.96
CHGAP10645 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC21.07■□□□□ 0.96
CHGAP10645 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC21.07■□□□□ 0.96
CHGAP10645 AL132780.4-201ENST00000624870 1135 ntBASIC21.07■□□□□ 0.96
CHGAP10645 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHGAP10645 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC21.07■□□□□ 0.96
CHGAP10645 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CHGAP10645 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHGAP10645 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHGAP10645 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC21.07■□□□□ 0.96
CHGAP10645 AC006504.5-208ENST00000588784 2401 ntBASIC21.07■□□□□ 0.96
CHGAP10645 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC21.07■□□□□ 0.96
CHGAP10645 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
CHGAP10645 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CHGAP10645 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHGAP10645 AL162727.3-201ENST00000635661 2787 ntBASIC21.07■□□□□ 0.96
CHGAP10645 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21.07■□□□□ 0.96
CHGAP10645 NORAD-201ENST00000565493 5339 ntBASIC21.07■□□□□ 0.96
CHGAP10645 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHGAP10645 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CHGAP10645 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHGAP10645 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHGAP10645 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
CHGAP10645 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC21.06■□□□□ 0.96
CHGAP10645 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CHGAP10645 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHGAP10645 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC21.06■□□□□ 0.96
CHGAP10645 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC21.06■□□□□ 0.96
CHGAP10645 RN7SL81P-201ENST00000493781 261 ntBASIC21.06■□□□□ 0.96
CHGAP10645 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CHGAP10645 IGHVIII-5-2-201ENST00000522505 261 ntBASIC21.06■□□□□ 0.96
CHGAP10645 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC21.06■□□□□ 0.96
CHGAP10645 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC21.06■□□□□ 0.96
CHGAP10645 CMC2-224ENST00000630396 481 ntTSL 5 BASIC21.06■□□□□ 0.96
CHGAP10645 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHGAP10645 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHGAP10645 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHGAP10645 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
CHGAP10645 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHGAP10645 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC21.05■□□□□ 0.96
CHGAP10645 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHGAP10645 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC21.05■□□□□ 0.96
CHGAP10645 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHGAP10645 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHGAP10645 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHGAP10645 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHGAP10645 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC21.05■□□□□ 0.96
CHGAP10645 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHGAP10645 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHGAP10645 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC21.05■□□□□ 0.96
CHGAP10645 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CHGAP10645 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC21.05■□□□□ 0.96
CHGAP10645 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHGAP10645 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHGAP10645 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHGAP10645 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC21.05■□□□□ 0.96
CHGAP10645 ZEB1-AS1-208ENST00000607166 2503 ntBASIC21.05■□□□□ 0.96
CHGAP10645 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHGAP10645 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CHGAP10645 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC21.05■□□□□ 0.96
CHGAP10645 MARK2P16-201ENST00000605714 1723 ntBASIC21.05■□□□□ 0.96
CHGAP10645 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CHGAP10645 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC21.05■□□□□ 0.96
CHGAP10645 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC21.05■□□□□ 0.96
CHGAP10645 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHGAP10645 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC21.05■□□□□ 0.96
CHGAP10645 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHGAP10645 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC21.05■□□□□ 0.96
CHGAP10645 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHGAP10645 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHGAP10645 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC21.05■□□□□ 0.96
CHGAP10645 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC21.05■□□□□ 0.96
CHGAP10645 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHGAP10645 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHGAP10645 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHGAP10645 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHGAP10645 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHGAP10645 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHGAP10645 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC21.05■□□□□ 0.96
CHGAP10645 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC21.05■□□□□ 0.96
CHGAP10645 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 319.8 ms